RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 TSPAN19P0C672 248 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 ASAH2BP0C7U1 165 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 SAGP10523 405 aaPredicted RBP12.23□□□□□ -0.45
PRPF18-201ENST00000320054 IMPDH2P12268 514 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 OSMP13725 252 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 CPN1P15169 458 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF708P17019 499 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 SFTPDP35247 375 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 LHX2P50458 406 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 ESRRGP62508 458 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 CTU2Q2VPK5 515 aaKnown RBP12.23□□□□□ -0.45
PRPF18-201ENST00000320054 PDSS1Q5T2R2 415 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 RPL13AP3Q6NVV1 102 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 MEX3DQ86XN8 651 aaKnown RBP12.23□□□□□ -0.45
PRPF18-201ENST00000320054 SLC43A2Q8N370 569 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 MOGAT1Q96PD6 335 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 OR5B2Q96R09 309 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 TAPBPLQ9BX59 468 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 GABARAPL3Q9BY60 117 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 EXO5Q9H790 373 aa12.23□□□□□ -0.45
PRPF18-201ENST00000320054 SMPD3Q9NY59 655 aaPredicted RBP12.23□□□□□ -0.45
PRPF18-201ENST00000320054 ATRXP46100 2492 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 SVILO95425 2214 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 A0A0J9YW62 118 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 LRRN3E7EW58 273 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 NPIPA5E9PKD4 350 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 MITFO75030 526 aaPredicted RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 PTP4A3O75365 173 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 OPN1LWP04000 364 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 TP53P04637 393 aaPredicted RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 HIST1H2ABP04908 130 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 STARP49675 285 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 DIO1P49895 249 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 CLDN18P56856 261 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 CLDN20P56880 219 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 NUP107P57740 925 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 RPS4XP62701 263 aaKnown RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 CSNK2A1P68400 391 aaPredicted RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 SLC35A1P78382 337 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 FHL1Q13642 323 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF239Q16600 458 aaKnown RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 KRTCAP3Q53RY4 240 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 PCSK4Q6UW60 755 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ZNF620Q6ZNG0 422 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 HIST3H2AQ7L7L0 130 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 GALNT5Q7Z7M9 940 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 OAFQ86UD1 273 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 MEIOBQ8N635 442 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 LRRC17Q8N6Y2 441 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 OR13C2Q8NGS9 318 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 OR2V1Q8NHB1 315 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 SMPDL3BQ92485 455 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 HIST1H2ACQ93077 130 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ADGRG7Q96K78 797 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 GPR137Q96N19 417 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ASPNQ9BXN1 380 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 TSPAN10Q9H1Z9 355 aaPredicted RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ALKBH4Q9NXW9 302 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 MRPL39Q9NYK5 338 aaKnown RBP12.22□□□□□ -0.45
PRPF18-201ENST00000320054 IL20Q9NYY1 176 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 LUZP4Q9P127 313 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 NPIPA1Q9UND3 350 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 HIF3AQ9Y2N7 669 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 CDH10Q9Y6N8 788 aa12.22□□□□□ -0.45
PRPF18-201ENST00000320054 ARHGAP21Q5T5U3 1957 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 IGSF10Q6WRI0 2623 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 OR14I1A6ND48 311 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 SULT2B1O00204 365 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 EIF1AYO14602 144 aaKnown RBP12.21□□□□□ -0.45
PRPF18-201ENST00000320054 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
PRPF18-201ENST00000320054 RCBTB2O95199 551 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 SNAP29O95721 258 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
PRPF18-201ENST00000320054 GRPRP30550 384 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 UQCRC1P31930 480 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 HSPA13P48723 471 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 AGFG1P52594 562 aaKnown RBP12.21□□□□□ -0.45
PRPF18-201ENST00000320054 SUCLG1P53597 346 aaKnown RBP12.21□□□□□ -0.45
PRPF18-201ENST00000320054 AQP4P55087 323 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 CLDN15P56746 228 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 OR2B6P58173 313 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 RAC3P60763 192 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 TAF11Q15544 211 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 OR7A5Q15622 319 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 SGCBQ16585 318 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 ARHGAP11AQ6P4F7 1023 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 IZUMO2Q6UXV1 221 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 KIF18BQ86Y91 864 aa12.21□□□□□ -0.45
PRPF18-201ENST00000320054 OR5J2Q8NH18 312 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms