RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 SPIN1Q9Y657 262 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 M0R082 166 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 NPIPB7O75200 414 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 CLIC3O95833 236 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ANXA8P13928 327 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ELK4P28324 431 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 GRPRP30550 384 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 VHLP40337 213 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC9A3P48764 834 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 LHX2P50458 406 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 CLDN15P56746 228 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 NUP107P57740 925 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 FAHD1Q6P587 224 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 GPAT4Q86UL3 456 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 KIF18BQ86Y91 864 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 CCDC103Q8IW40 242 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 RNF113BQ8IZP6 322 aaKnown RBP13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF417Q8TAU3 575 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 FANK1Q8TC84 345 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 NRBF2Q96F24 287 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 TNFRSF13CQ96RJ3 184 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF587Q96SQ5 575 aaPredicted RBP13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 TAPBPLQ9BX59 468 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 SRXN1Q9BYN0 137 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 UCK2Q9BZX2 261 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ENKD1Q9H0I2 346 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 TOR3AQ9H497 397 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 KLHL13Q9P2N7 655 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF814B7Z6K7 855 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 M0R129 80 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF208O43345 1280 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 CXCL13O43927 109 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 RAMP1O60894 148 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 OR7A10O76100 309 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 F13BP05160 661 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 SGCBQ16585 318 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 HBMQ6B0K9 141 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 SIAH3Q8IW03 269 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 OR10D3Q8NH80 312 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 GNPDA2Q8TDQ7 276 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 CYGBQ8WWM9 190 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 UCN2Q96RP3 112 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 TIMP4Q99727 224 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 GABARAPL1Q9H0R8 117 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 VCXQ9H320 206 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 ORC6Q9Y5N6 252 aa13.83□□□□□ -0.2
PDLIM5-202ENST00000318007 UNC119BA6NIH7 251 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ADAP00813 363 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 BGLAPP02818 100 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 AQP2P41181 271 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 CTBP2P56545 445 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 CLDN18P56856 261 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 KLRB1Q12918 225 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 CTU2Q2VPK5 515 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 C6orf52Q5T4I8 152 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SMARCD3Q6STE5 483 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 C3P1Q6ZMU1 363 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 NANOGNBQ7Z5D8 188 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 MOSPD2Q8NHP6 518 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ROBO4Q8WZ75 1007 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SLC19A3Q9BZV2 496 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 LIPT2A6NK58 231 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 DLGAP1O14490 977 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 CRYABP02511 175 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ADORA3P0DMS8 318 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ENPP1P22413 925 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 FPR3P25089 353 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 GCKP35557 465 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 DLX5P56178 289 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 TSPAN31Q12999 210 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 THSD4Q6ZMP0 1018 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 GHDCQ8N2G8 530 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 TMEM99Q8N816 258 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SLC25A43Q8WUT9 341 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SAMD8Q96LT4 415 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF570Q96NI8 536 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 OR52D1Q9H346 318 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 QPCTLQ9NXS2 382 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SMPD3Q9NY59 655 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 SH3BGRL2Q9UJC5 107 aa13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 MRPS18CQ9Y3D5 142 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-202ENST00000318007 ARRDC5A6NEK1 342 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 KDM4EB2RXH2 506 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 KLF4O43474 513 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 HIST1H2ABP04908 130 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 CHMP24386 653 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 RPL4P36578 427 aaKnown RBP13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 CARD18P57730 90 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 VASNQ6EMK4 673 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 RPUSD3Q6P087 351 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms