RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ASIC5Q9NY37 505 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 GLS2Q9UI32 602 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 KCNE3Q9Y6H6 103 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 FITM1A5D6W6 292 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 H7C0S8 307 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 ACOT7O00154 380 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 LEFTY2O00292 366 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 SLC16A5O15375 505 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 EMC8O43402 210 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 PRKNO60260 465 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 LCMT2O60294 686 aaKnown RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 MPC2O95563 127 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 CHRM4P08173 479 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 GIMD1P0DJR0 217 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 SLC6A12P48065 614 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 EPHA4P54764 986 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 TNK1Q13470 666 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 EXOSC7Q15024 291 aaKnown RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 EIPR1Q53HC9 387 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 OR4C11Q6IEV9 310 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 FAM71E1Q6IPT2 247 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 KIAA1324Q6UXG2 1013 aaKnown RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 RAB11FIP2Q7L804 512 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 SVBPQ8N300 66 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 SLC16A11Q8NCK7 471 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 OR4C15Q8NGM1 316 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 MFSD8Q8NHS3 518 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 RNASE11Q8TAA1 199 aaKnown RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 UBTD2Q8WUN7 234 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 HERVK_113Q902F9 699 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 ARL11Q969Q4 196 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 C14orf79Q96F83 325 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 RBM18Q96H35 190 aaKnown RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 POTEKPQ9BYX7 375 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 TMEM38AQ9H6F2 299 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 MEPEQ9NQ76 525 aaPredicted RBP6.98□□□□□ -1.29
CDHR3-201ENST00000317716 NTMQ9P121 344 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 GPR160Q9UJ42 338 aa6.98□□□□□ -1.29
CDHR3-201ENST00000317716 MYOFQ9NZM1 2061 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 A0A0A6YYH2 397 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TMEM72A0PK05 275 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 EPOPA6NHQ4 379 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 A6NJ64 397 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF98A6NK75 572 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 WASH3PC4AMC7 463 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TMPRSS11DO60235 418 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PRAF2O60831 178 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 APOC1P02654 83 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CTRB1P17538 263 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TUBG1P23258 451 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 HLA-FP30511 346 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SLC6A1P30531 599 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 LTBQ06643 244 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TSC22D1Q15714 1073 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 GGTA1PQ4G0N0 100 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 DMRTC1Q5HYR2 192 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CTRB2Q6GPI1 263 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SLC35D2Q76EJ3 337 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SLC35F2Q8IXU6 374 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 STPG2Q8N412 459 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ACBD4Q8NC06 268 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 OR14C36Q8NHC7 312 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 NR4A3Q92570 626 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 KCTD12Q96CX2 325 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PDXPQ96GD0 296 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 USB1Q9BQ65 265 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TAPBPLQ9BX59 468 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CST11Q9H112 138 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 DNTTIP1Q9H147 329 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 IFT22Q9H7X7 185 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 EVA1AQ9H8M9 152 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 C12orf10Q9HB07 376 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SIDT1Q9NXL6 827 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 FBXO4Q9UKT5 387 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CCL26Q9Y258 94 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PRAMEF25A6NGN4 478 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 IDSB3KWA1 339 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PYCARD-AS1I3L0S3 204 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 KCNAB3O43448 404 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 RHOP08100 348 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TACSTD2P09758 323 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PCSK2P16519 638 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CAPZA1P52907 286 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PDX1P52945 283 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CHAF1BQ13112 559 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PEA15Q15121 130 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SLC9A3R2Q15599 337 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PDSS1Q5T2R2 415 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 OR10K2Q6IF99 312 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 OR4Q3Q8NH05 313 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PHOSPHO1Q8TCT1 267 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TSSK2Q96PF2 358 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 NMNAT3Q96T66 252 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PELOQ9BRX2 385 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF334Q9HCZ1 680 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ACKR4Q9NPB9 350 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms