RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.31■□□□□ 0.23e-6■□□□□ 10.5
HMGA1-201ENST00000311487 EMC4Q5J8M3 183 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 C1orf140Q5VVS0 124 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 HBMQ6B0K9 141 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 CD163Q86VB7 1156 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 ZDHHC13Q8IUH4 622 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 RPRMLQ8N4K4 120 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 OR9Q2Q8NGE9 314 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 OR10D3Q8NH80 312 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 DDIT4LQ96D03 193 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 KLHL15Q96M94 604 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 MOGAT1Q96PD6 335 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 SRXN1Q9BYN0 137 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 FAM192AQ9GZU8 254 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 REEP1Q9H902 201 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 KIAA1549Q9HCM3 1950 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 A8MVM7 634 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 B8ZZF3 427 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 E2F6O75461 281 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 CH25HO95992 272 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 ACTL6AO96019 429 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 HPRP00739 348 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 ELK4P28324 431 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 DIO1P49895 249 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 ADARB1P78563 741 aaKnown RBP16.31■□□□□ 0.2
HMGA1-201ENST00000311487 SGCBQ16585 318 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 NCCRP1Q6ZVX7 275 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-201ENST00000311487 LSM14AQ8ND56 463 aaKnown RBP16.31■□□□□ 0.2
HMGA1-201ENST00000311487 DTNBP1Q96EV8 351 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 TUBA1CQ9BQE3 449 aa16.31■□□□□ 0.2
HMGA1-201ENST00000311487 A0A1W2PRQ8 180 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 SULT2B1O00204 365 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 SLC19A2O60779 497 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 TFAP2AP05549 437 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 FPR1P21462 350 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 GPR4P46093 362 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 DLX5P56178 289 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 CARD18P57730 90 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 LTBQ06643 244 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 DGCR6Q14129 220 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 KDM8Q8N371 416 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 OR5K1Q8NHB7 308 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 ROBO4Q8WZ75 1007 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 OSTF1Q92882 214 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 SARAFQ96BY9 339 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 FAM46AQ96IP4 442 aaKnown RBP16.3■□□□□ 0.2
HMGA1-201ENST00000311487 UCN2Q96RP3 112 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 PTDSS2Q9BVG9 487 aa16.3■□□□□ 0.2
HMGA1-201ENST00000311487 ADAMDEC1O15204 470 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OR10H3O60404 316 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 CLIC3O95833 236 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 CLPTM1O96005 669 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 THRBP10828 461 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 IFI30P13284 250 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ENPP1P22413 925 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 UQCRFS1P47985 274 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OR2B6P58173 313 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 USP51Q70EK9 711 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 RRM2BQ7LG56 351 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 CCDC103Q8IW40 242 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OR4K5Q8NGD3 323 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OSBPL10Q9BXB5 764 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 USE1Q9NZ43 259 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 MYRFQ9Y2G1 1151 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ENO4A6NNW6 628 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ZNF814B7Z6K7 855 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 H0YAE9 185 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 NPIPB7O75200 414 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 AKR7A3O95154 331 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 EDN3P14138 238 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 MAKP20794 623 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 PPP2R2BQ00005 443 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 EIF2S3LQ2VIR3 472 aaKnown RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 MEIOBQ8N635 442 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OR4C15Q8NGM1 316 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 OR2V1Q8NHB1 315 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ACOT11Q8WXI4 607 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ZNF775Q96BV0 537 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 MPP4Q96JB8 637 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ADGRG7Q96K78 797 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 DHRS1Q96LJ7 313 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 TRIB1Q96RU8 372 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 GPA33Q99795 319 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 FUZQ9BT04 418 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 ZNF426Q9BUY5 554 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 POLR2J2Q9GZM3 115 aaKnown RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 POLR2J3Q9H1A7 115 aaKnown RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 SMURF2Q9HAU4 748 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 MED31Q9Y3C7 131 aa16.29■□□□□ 0.2
HMGA1-201ENST00000311487 SPIN1Q9Y657 262 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-201ENST00000311487 SH3PXD2BA1X283 911 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 ZNF208O43345 1280 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 RAMP1O60894 148 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 ATP6V1B1P15313 513 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 PON3Q15166 354 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 ZIK1Q3SY52 487 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-201ENST00000311487 RPTNQ6XPR3 784 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 TMPPEQ6ZT21 453 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms