RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SLC14A2Q15849 920 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 FAM111BQ6SJ93 734 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 PLPP5Q8NEB5 264 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 FAM213BQ8TBF2 198 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 MMABQ96EY8 250 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 FER1L6-AS2Q96M78 137 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 IP6K3Q96PC2 410 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 ERVMER34-1Q9H9K5 563 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 NDUFB2O95178 105 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 LALBAP00709 142 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TAGLN2P37802 199 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 ARSDP51689 593 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 GPLD1P80108 840 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 MALLQ13021 153 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SQSTM1Q13501 440 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 CST9LP1Q5W188 147 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 UNC5DQ6UXZ4 953 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 FCRLAQ7L513 359 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 BAGE2Q86Y30 109 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 CBARPQ8N350 705 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 OR5L2Q8NGL0 311 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 OR10Z1Q8NGY1 313 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SCAMP4Q969E2 229 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RAB39BQ96DA2 213 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 C12orf57Q99622 126 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 DEFB126Q9BYW3 111 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 OR1A2Q9Y585 309 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 LAMB1P07942 1786 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 DICER1Q9UPY3 1922 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 TMEM82A0PJX8 343 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 DPM1O60762 260 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 ALPLP05186 524 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 PGCP20142 388 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 UCNP55089 124 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 PDZK1IP1Q13113 114 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 VEZF1Q14119 521 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 IRF4Q15306 451 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 PIP5KL1Q5T9C9 394 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RNF111Q6ZNA4 994 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 TMEM163Q8TC26 289 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 SCARB1Q8WTV0 552 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 RBMXL1Q96E39 390 aaKnown RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 FAM71F1Q96KD3 344 aaPredicted RBP7.63□□□□□ -1.19
VPS41-202ENST00000310301 IL17FQ96PD4 163 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 OR1F2PQ96R84 312 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 INTS14Q96SY0 518 aa7.63□□□□□ -1.19
VPS41-202ENST00000310301 A6NLC8 198 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 FGF4P08620 206 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 PER3P56645 1201 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 MRPS34P82930 218 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 MRPL49Q13405 166 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 CATSPEREQ5SY80 951 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SERPINA11Q86U17 422 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 OR4N5Q8IXE1 308 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 ZNF440Q8IYI8 595 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 ACVR1CQ8NER5 493 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 CREB3L4Q8TEY5 395 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 BSCL2Q96G97 398 aaPredicted RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 SLC6A18Q96N87 628 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SORBS1Q9BX66 1292 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 TP53TG5Q9Y2B4 290 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 MYH7BA7E2Y1 1941 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 C20orf202A1L168 122 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 PRSS38A1L453 326 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 KCNK2O95069 426 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 AK1P00568 194 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 ACP2P11117 423 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 PSMB1P20618 241 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 GABRR1P24046 479 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 OTX2P32243 289 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 GDNFP39905 211 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 CLDN2P57739 230 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 TAS2R30P59541 319 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 RPS25P62851 125 aaKnown RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 BDH1Q02338 343 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 PLCXD2Q0VAA5 305 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 DEFB134Q4QY38 66 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 OR2G6Q5TZ20 316 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SLC51BQ86UW2 128 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 WDTC1Q8N5D0 677 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 FRMD1Q8N878 549 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 ZBTB44Q8NCP5 570 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 DTD2Q96FN9 168 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SLC39A13Q96H72 371 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SLC22A12Q96S37 553 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 C20orf24Q9BUV8 137 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 BABAM2Q9NXR7 383 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 ZNF230Q9UIE0 474 aaPredicted RBP7.62□□□□□ -1.19
VPS41-202ENST00000310301 IER3IP1Q9Y5U9 82 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 A0A1W2PPC4 97 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 PNPP00491 289 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 TCRBP04435 133 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 TNK1Q13470 666 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 TMUB2Q71RG4 321 aa7.62□□□□□ -1.19
VPS41-202ENST00000310301 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms