RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 LNX2Q8N448 690 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 LINC00471Q8N535 108 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 OR6N2Q8NGY6 317 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 OR52I2Q8NH67 350 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 OR56B4Q8NH76 319 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 SLC35A4Q96G79 324 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 SLX1AQ9BQ83 275 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 C20orf85Q9H1P6 137 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.54
RETREG3-201ENST00000309428 CALML5Q9NZT1 146 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 GSKIPQ9P0R6 139 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 THAP10Q9P2Z0 257 aaPredicted RBP11.71□□□□□ -0.54
RETREG3-201ENST00000309428 POLR1DQ9Y2S0 133 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 TEX51A0A1B0GUA7 166 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 E9PI62 339 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ITGA10O75578 1167 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ADPRHP54922 357 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 NLRC3Q7RTR2 1065 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 OR8D4Q8NGM9 314 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 RSC1A1Q92681 617 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 OR8D2Q9GZM6 311 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 UBQLN3Q9H347 655 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 SFXN1Q9H9B4 322 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 KLHL9Q9P2J3 617 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 MRTO4Q9UKD2 239 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 SCML1Q9UN30 329 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 A4GNTQ9UNA3 340 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 H7C1C5 153 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 EMC8O43402 210 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 MRPL19P49406 292 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 LCN6P62502 163 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 VASNQ6EMK4 673 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 LRRC25Q8N386 305 aaPredicted RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ELP4Q96EB1 424 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 PCBD2Q9H0N5 130 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 IFT46Q9NQC8 304 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 hCG_1807616A0A1W2PRN6 198 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 SLC22A31A6NKX4 558 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 H0YGG7 62 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 HPXP02790 462 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 HIST1H2ABP04908 130 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 DBIP07108 87 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 PRPH2P23942 346 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ARF3P61204 181 aaPredicted RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 TSPAN31Q12999 210 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 HIST3H2AQ7L7L0 130 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 KRT77Q7Z794 578 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 OR11H4Q8NGC9 324 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF563Q8TA94 476 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ACOT11Q8WXI4 607 aaPredicted RBP11.7□□□□□ -0.54
RETREG3-201ENST00000309428 HIST1H2ACQ93077 130 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 HHIPQ96QV1 700 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 ENKD1Q9H0I2 346 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 C20orf141Q9NUB4 165 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 IER3IP1Q9Y5U9 82 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 TRANK1O15050 2925 aa11.7□□□□□ -0.54
RETREG3-201ENST00000309428 CASC3O15234 703 aaKnown RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 C5AR1P21730 350 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 REEP5Q00765 189 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 TPBGQ13641 420 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ZNHIT3Q15649 155 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 MAPK14Q16539 360 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 KLHL26Q53HC5 615 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 METTL11BQ5VVY1 283 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 NRROSQ86YC3 692 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 OR13H1Q8NG92 308 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 OR56A1Q8NGH5 318 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 OR10K1Q8NGX5 313 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ANGPTL6Q8NI99 470 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 FBLIM1Q8WUP2 373 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 FAM3CQ92520 227 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 NSMAFQ92636 917 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 FCRL1Q96LA6 429 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 CXorf58Q96LI9 332 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 SLC6A7Q99884 636 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ZNF416Q9BWM5 594 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 ATG5Q9H1Y0 275 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 C11orf98E9PRG8 122 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 F8W036 122 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 MAN2B1O00754 1011 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 EIF1AYO14602 144 aaKnown RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 HCRTR1O43613 425 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 PLGP00747 810 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-201ENST00000309428 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
RETREG3-201ENST00000309428 OCLNQ16625 522 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms