RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 USP22Q9UPT9 525 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 RASD1Q9Y272 281 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 CORINQ9Y5Q5 1042 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 PCNX1Q96RV3 2341 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 IGKV3D-15A0A087WSY6 115 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 AKAP8O43823 692 aaKnown RBP17.64■□□□□ 0.41
VEGFB-201ENST00000309422 GCM2O75603 506 aaPredicted RBP17.64■□□□□ 0.41
VEGFB-201ENST00000309422 AKR7A3O95154 331 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 STAMBPO95630 424 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 CGAP01215 116 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 NQO1P15559 274 aaKnown RBP17.64■□□□□ 0.41
VEGFB-201ENST00000309422 PPP3CBP16298 524 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 IL32P24001 234 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 SLC16A1P53985 500 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 CDH12P55289 794 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 SELENOWP63302 87 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 CYP4Z1Q86W10 505 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 NSL1Q96IY1 281 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 DACH2Q96NX9 599 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 ZNF300Q96RE9 604 aaPredicted RBP17.64■□□□□ 0.41
VEGFB-201ENST00000309422 TMEM43Q9BTV4 400 aa17.64■□□□□ 0.41
VEGFB-201ENST00000309422 SH3D21A4FU49 640 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 AQP7P3A6NL99 342 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 OR5F1O95221 314 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 GOSR1O95249 250 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 SERPINA1P01009 418 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 UGT2B10P36537 528 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 SPATS1Q496A3 300 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 IFI44LQ53G44 452 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 ZNF474Q6S9Z5 364 aaPredicted RBP17.63■□□□□ 0.41
VEGFB-201ENST00000309422 TFAP2EQ6VUC0 442 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 FITM2Q8N6M3 262 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 ACBD4Q8NC06 268 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 SLC41A3Q96GZ6 507 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 USB1Q9BQ65 265 aaKnown RBP17.63■□□□□ 0.41
VEGFB-201ENST00000309422 PRR14Q9BWN1 585 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 HDHD5Q9BXW7 423 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 PCDHAC1Q9H158 963 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 MCCC2Q9HCC0 563 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 CRIM1Q9NZV1 1036 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 SLC7A7Q9UM01 511 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 DOCK7Q96N67 2140 aa17.63■□□□□ 0.41
VEGFB-201ENST00000309422 KIAA1549Q9HCM3 1950 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 KRT33AO76009 404 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 OR6A2O95222 327 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 CNOT4O95628 575 aaKnown RBP17.62■□□□□ 0.41
VEGFB-201ENST00000309422 EPXP11678 715 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 GGT1P19440 569 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 OR3A2P47893 321 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 FAM27E3Q08E93 113 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 SNTB1Q13884 538 aaKnown RBP17.62■□□□□ 0.41
VEGFB-201ENST00000309422 C1DQ13901 141 aaKnown RBP17.62■□□□□ 0.41
VEGFB-201ENST00000309422 P2RY6Q15077 328 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 NUFIP2Q7Z417 695 aaKnown RBP17.62■□□□□ 0.41
VEGFB-201ENST00000309422 CCDC103Q8IW40 242 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 DEFB107AQ8IZN7 70 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 STEAP2Q8NFT2 490 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 OR6S1Q8NH40 331 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 KTI12Q96EK9 354 aaPredicted RBP17.62■□□□□ 0.41
VEGFB-201ENST00000309422 SLC19A3Q9BZV2 496 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 UPB1Q9UBR1 384 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 B3GALT5Q9Y2C3 310 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 GPR52Q9Y2T5 361 aa17.62■□□□□ 0.41
VEGFB-201ENST00000309422 HEATR5AQ86XA9 2040 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 CACNA1CQ13936 2221 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ZNF716A6NP11 495 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 NPIPB7O75200 414 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 MT-ATP6P00846 226 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 THRBP10828 461 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ZNF43P17038 809 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 TCN1P20061 433 aaPredicted RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 OR1E2P47887 323 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 H3F3AP84243 136 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 SLC25A3Q00325 362 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ST3GAL3Q11203 375 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 NPTX1Q15818 432 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 GLYATQ6IB77 296 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ABHD12BQ7Z5M8 362 aaPredicted RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 RBM45Q8IUH3 476 aaKnown RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ARHGAP24Q8N264 748 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 RNF148Q8N7C7 305 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 TMEM99Q8N816 258 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 OR9K2Q8NGE7 335 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 LINC01560Q8TB33 94 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 KISS1RQ969F8 398 aaPredicted RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 ZNF775Q96BV0 537 aaPredicted RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 EGFL7Q9UHF1 273 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 FAM32AQ9Y421 112 aaKnown RBP17.61■□□□□ 0.41
VEGFB-201ENST00000309422 PCNX3Q9H6A9 2034 aa17.61■□□□□ 0.41
VEGFB-201ENST00000309422 B2RBV5 119 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 HIST1H2ABP04908 130 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 UMPSP11172 480 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 TNFRSF1BP20333 461 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 Q6ZT83 130 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 CBLL1Q75N03 491 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 HIST3H2AQ7L7L0 130 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 SCAIQ8N9R8 606 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 HIST1H2ACQ93077 130 aa17.6■□□□□ 0.41
VEGFB-201ENST00000309422 MCUR1Q96AQ8 359 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms