RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 SF3A2Q15428 464 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 LAX1Q8IWV1 398 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF100Q8IYN0 542 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ATOH1Q92858 354 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SYNPO2LQ9H987 977 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 HINT3Q9NQE9 182 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 NXT1Q9UKK6 140 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CASP8AP2Q9UKL3 1982 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 IGHV3-20A0A0C4DH32 117 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ALOX12BO75342 701 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR7A10O76100 309 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 IFNA21P01568 189 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 PRSS3P35030 304 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 C21orf58P58505 322 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 FXYD6P3P58550 94 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ACTBP60709 375 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ACTG1P63261 375 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SRYQ05066 204 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SQSTM1Q13501 440 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMEM244Q5VVB8 128 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 DPY19L4Q7Z388 723 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 BCORP1Q8N888 145 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 RCBTB1Q8NDN9 531 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 GIMAP5Q96F15 307 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 Q96M85 177 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CTRCQ99895 268 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 KCNE3Q9Y6H6 103 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 MAKP20794 623 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CDNFQ49AH0 187 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 PRAMEF20Q5VT98 475 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF511Q8NB15 262 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 THAP6Q8TBB0 222 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 MVB12AQ96EY5 273 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 FAM71F1Q96KD3 344 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TEAD3Q99594 435 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 NRTNQ99748 197 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SIRT5Q9NXA8 310 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 A3GALT2U3KPV4 340 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 C13orf42A0A1B0GVH6 325 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 IL7P13232 177 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 PPICP45877 212 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CSNK1A1P48729 337 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 PCBP4P57723 403 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CSNK2A1P68400 391 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TBC1D25Q3MII6 688 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMEM176BQ3YBM2 270 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 YOD1Q5VVQ6 348 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 KIAA0907Q7Z7F0 614 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 PLCZ1Q86YW0 608 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 SIMC1Q8NDZ2 872 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 NLGN4YQ8NFZ3 816 aaPredicted RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ABHD4Q8TB40 342 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 CHPT1Q8WUD6 406 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 ASB17Q8WXJ9 295 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 NUDT22Q9BRQ3 303 aa10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
PCDHGC3-201ENST00000308177 TMEM269A0A1B0GVZ9 245 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 LILRA5A6NI73 299 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 PLATP00750 562 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 IGHG1P01857 330 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 DNASE1P24855 282 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 SHC1P29353 583 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 GLP1RP43220 463 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF81P51508 661 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 AKIRIN2Q53H80 203 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 SOWAHCQ53LP3 525 aaPredicted RBP10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC35D2Q76EJ3 337 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 PHC2Q8IXK0 858 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 TSLPQ969D9 159 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLC41A2Q96JW4 573 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 OR10A4Q9H209 315 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 SLAMF7Q9NQ25 335 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 PAQR5Q9NXK6 330 aaPredicted RBP10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 ZNF224Q9NZL3 707 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 CORINQ9Y5Q5 1042 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 TRIOBPQ9H2D6 2365 aa10.52□□□□□ -0.72
PCDHGC3-201ENST00000308177 TRBV5-3A0A0A0MS03 114 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ACOD1A6NK06 481 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 NOTOA8MTQ0 251 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 NPIPB8E9PQR5 432 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 F5H5K5 113 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 CREBL2O60519 120 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 ETV5P41161 510 aa10.52□□□□□ -0.73
PCDHGC3-201ENST00000308177 POU3F4P49335 361 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms