RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DNAJB11Q9UBS4 358 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 LINC01387J3KSC0 135 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 TDRD6O60522 2096 aaKnown RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 FCMRO60667 390 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 MITFO75030 526 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF432O94892 652 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 RLN1P04808 185 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 CPEB3Q8NE35 698 aaKnown RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF675Q8TD23 568 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 NUDT8Q8WV74 236 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF501Q96CX3 271 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 FAM71F1Q96KD3 344 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-202ENST00000306042 OBP2BQ9NPH6 170 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 COMMD3Q9UBI1 195 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 ABCG2Q9UNQ0 655 aa8.5□□□□□ -1.05
PTPRE-202ENST00000306042 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 BTBD17A6NE02 478 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 C7P10643 843 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ACP2P11117 423 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TSPAN31Q12999 210 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 DUSP8Q13202 625 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 FHL5Q5TD97 284 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 OR2A2Q6IF42 318 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 MBOAT2Q6ZWT7 520 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 SLC35F2Q8IXU6 374 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TRUB1Q8WWH5 349 aaKnown RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 SGCDQ92629 289 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ZFP3Q96NJ6 502 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TNFRSF13CQ96RJ3 184 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 FN3KQ9H479 309 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PRMT8Q9NR22 394 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 FAIMQ9NVQ4 179 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ING4Q9UNL4 249 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 AP3S2P59780 193 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 GDF7Q7Z4P5 450 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ADGRG5Q8IZF4 528 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PIAS4Q8N2W9 510 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 SLC43A2Q8N370 569 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PLPP5Q8NEB5 264 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 OR10G3Q8NGC4 313 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PSMA8Q8TAA3 256 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 GPR179Q6PRD1 2367 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PRAMEF27A3QJZ7 478 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF195O14628 629 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 XPNPEP2O43895 674 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF35P13682 527 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 COX6B1P14854 86 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 HNF1AP20823 631 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 SUMO3P55854 103 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 RPS23P62266 143 aaKnown RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 WIPI1Q5MNZ9 446 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TMPRSS7Q7RTY8 843 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 MAML2Q8IZL2 1156 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 CA5BP1Q8WTZ4 195 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 RAB33BQ9H082 229 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 FAM118AQ9NWS6 357 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 DUSP13Q9UII6 198 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 DAPK2Q9UIK4 370 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 MED16Q9Y2X0 877 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 LRRC42Q9Y546 428 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 FAM186AA6NE01 2351 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 GYPBP06028 91 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 MADCAM1Q13477 382 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 PGGHGQ32M88 737 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 HSD17B12Q53GQ0 312 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 B3GNTL1Q67FW5 361 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF704Q6ZNC4 412 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 LINGO2Q7L985 606 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TSPYL5Q86VY4 417 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 KLBQ86Z14 1044 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 KLHDC8BQ8IXV7 354 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 ELP5Q8TE02 316 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 LIN37Q96GY3 246 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 NEDD4LQ96PU5 975 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TNFRSF12AQ9NP84 129 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 SIDT1Q9NXL6 827 aaKnown RBP8.49□□□□□ -1.05
PTPRE-202ENST00000306042 WASF3Q9UPY6 502 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 TSC22D4Q9Y3Q8 395 aa8.49□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1W2PQM1 296 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 OR6C65A6NJZ3 312 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 LILRB5O75023 590 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ACP1P24666 158 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 RORCP51449 518 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 SNU13P55769 128 aaKnown RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TRAM1Q15629 374 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 DHRS4L2Q6PKH6 230 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF845Q96IR2 970 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 GALNT9Q9HCQ5 603 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ABCB10Q9NRK6 738 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 USP22Q9UPT9 525 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TRBV4-1A0A0J9YWV2 114 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 AGAP5A6NIR3 686 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 M0R082 166 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ABHD16AO95870 558 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PTRH1Q86Y79 214 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms