RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SOX8P57073 446 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ARF3P61204 181 aaPredicted RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 CHRNEQ04844 493 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ZNF79Q15937 498 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ZNF750Q32MQ0 723 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 GLYR1Q49A26 553 aaPredicted RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 FLYWCH1Q4VC44 716 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 AADACL4Q5VUY2 407 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 AGAP6Q5VW22 663 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 LIPKQ5VXJ0 399 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 SP5Q6BEB4 398 aaPredicted RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 CDC73Q6P1J9 531 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 FAM180AQ6UWF9 173 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ZNF730Q6ZMV8 503 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 QSOX2Q6ZRP7 698 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 OLIG3Q7RTU3 272 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ST6GALNAC3Q8NDV1 305 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 OR8D4Q8NGM9 314 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 OR9A2Q8NGT5 310 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 BRIX1Q8TDN6 353 aaKnown RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 GPR151Q8TDV0 419 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 OSTF1Q92882 214 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 UFD1Q92890 307 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 RFKQ969G6 155 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 RNFT2Q96EX2 444 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 MMABQ96EY8 250 aaPredicted RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 KCTD7Q96MP8 289 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 TEX12Q9BXU0 123 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 HOXD1Q9GZZ0 328 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 EGLN3Q9H6Z9 239 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 WDR54Q9H977 334 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 SNTG1Q9NSN8 517 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 PHF11Q9UIL8 331 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 NXT1Q9UKK6 140 aaKnown RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 CHST2Q9Y4C5 530 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 SPIN1Q9Y657 262 aaPredicted RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 SPTBN1Q01082 2364 aaKnown RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 CCDC88CQ9P219 2028 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 UNC79Q9P2D8 2635 aa7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 PRRC2CQ9Y520 2896 aaKnown RBP7.16□□□□□ -1.26
TM4SF1-201ENST00000305366 A0A0A6YYC8 382 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 NSG1A0A0A6YYJ2 146 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TRDV1A0A1B0GX56 115 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 PRSS44E7EML9 344 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 I3L1I5 382 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 AP3D1O14617 1153 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 RGS5O15539 181 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 ZNF254O75437 659 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 CDRT1O95170 752 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 THBS1P07996 1170 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 IFI6P09912 130 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TRAPPC2P0DI81 140 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TRAPPC2BP0DI82 140 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SMIM10L1P0DMW3 83 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SPTBP11277 2137 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GALP22466 123 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GCGRP47871 477 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 LSM11P83369 360 aaKnown RBP eCLIP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MAT1AQ00266 395 aaKnown RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TNFRSF17Q02223 184 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 RGS1Q08116 209 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GPR50Q13585 617 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 B3GNTL1Q67FW5 361 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MFSD12Q6NUT3 480 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 ZNF544Q6NX49 715 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 XKRXQ6PP77 449 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 RRM2BQ7LG56 351 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 C16orf62Q7Z3J2 963 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 VN1R4Q7Z5H5 301 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 VRK2Q86Y07 508 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 LAX1Q8IWV1 398 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 UBQLNLQ8IYU4 475 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 CSNK1A1LQ8N752 337 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GDPD1Q8N9F7 314 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 PLPP7Q8NBV4 271 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 OR52P1PQ8NH57 321 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 NINJ1Q92982 152 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TM4SF19Q96DZ7 209 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 OTUB1Q96FW1 271 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SLC35A4Q96G79 324 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SMIM10Q96HG1 83 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MS4A4EQ96PG1 132 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MACROD1Q9BQ69 325 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 QRSL1Q9H0R6 528 aaKnown RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SLC26A1Q9H2B4 701 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MTHFD2LQ9H903 347 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 SYNPO2LQ9H987 977 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 EXOGQ9Y2C4 368 aaKnown RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GSTK1Q9Y2Q3 226 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 GPR55Q9Y2T6 319 aaPredicted RBP7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 MED13Q9UHV7 2174 aa7.15□□□□□ -1.26
TM4SF1-201ENST00000305366 TRGV8A0A0C4DH27 118 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 IGHV3-20A0A0C4DH32 117 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 A0A1W2PS29 197 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 FITM1A5D6W6 292 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 OR2W5A6NFC9 320 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms