RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 C12orf71A8MTZ7 269 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 BICRALQ6AI39 1079 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 IL20RBQ6UXL0 311 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 MAMDC2Q7Z304 686 aaPredicted RBP13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 UFD1Q92890 307 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 TEAD3Q99594 435 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 HCAR1Q9BXC0 346 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ASPNQ9BXN1 380 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 GRHPRQ9UBQ7 328 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 CCDC187A0A096LP49 1063 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 AHCYP23526 432 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 LCN1P1Q5VSP4 162 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 OPN5Q6U736 354 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ELP5Q8TE02 316 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 CHRNA9Q9UGM1 479 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 SSR3Q9UNL2 185 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 LSM2Q9Y333 95 aaKnown RBP13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ANKUB1A6NFN9 424 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TRIM64BA6NI03 449 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM200CA6NKL6 621 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 A8MVM7 634 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 IGF2P01344 180 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 F13BP05160 661 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TFPIP10646 304 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 COX6A1P12074 109 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 RPS18P62269 152 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TUBA1BP68363 451 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 EGR4Q05215 589 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 PON3Q15166 354 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 NDUFAF7Q7L592 441 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 OR11G2Q8NGC1 345 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 PTP4A1Q93096 173 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 HGDQ93099 445 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 SEC14L4Q9UDX3 406 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF229Q9UJW7 825 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 C11orf98E9PRG8 122 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 IDH3BO43837 385 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 CELA2AP08217 269 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 CLUP10909 449 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TCEA1P23193 301 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TGFBR1P36897 503 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 SUMO3P55854 103 aaPredicted RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TMED1Q13445 227 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 SLC15A4Q8N697 577 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 SIRT6Q8N6T7 355 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 OR6K6Q8NGW6 343 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 ST8SIA1Q92185 356 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 RASD2Q96D21 266 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 LIN37Q96GY3 246 aaPredicted RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 EXOGQ9Y2C4 368 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 HIF3AQ9Y2N7 669 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 SLC6A5Q9Y345 797 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TEX13CA0A0J9YWL9 993 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 AKAP8O43823 692 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 CD14P08571 375 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 LEG1Q6P5S2 330 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 OR4K17Q8NGC6 315 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 OR51L1Q8NGJ5 315 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 M1APQ8TC57 530 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 CT55Q8WUE5 264 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 DDA1Q9BW61 102 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 FBXO9Q9UK97 447 aaPredicted RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 FARSAQ9Y285 508 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-201ENST00000303383 FBXO45P0C2W1 286 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 MSX1P28360 303 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 DBPQ10586 325 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 POU4F2Q12837 409 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 DCTN2Q13561 401 aaKnown RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF517Q6ZMY9 492 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM203Q969S6 136 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF524Q96C55 264 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 Q96M85 177 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 CDCP1Q9H5V8 836 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 YARS2Q9Y2Z4 477 aaKnown RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 ARPC3O15145 178 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 RNF13O43567 381 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 OR2T1O43869 369 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 CBFA2T3O75081 653 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 RPL18Q07020 188 aaKnown RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 FHL1Q13642 323 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 SSX1Q16384 188 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 TBC1D15Q8TC07 691 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms