RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 TMEM129A0AVI4 362 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM212A6NML5 194 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SEC14L5O43304 696 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 GPR75O95800 540 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 LCATP04180 440 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 PGAP1Q75T13 922 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 OR56B2PQ8NGI1 322 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM106AQ96A25 262 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 NICN1Q9BSH3 213 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SFXN1Q9H9B4 322 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ADAM23O75077 832 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 PRKRAO75569 313 aaKnown RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 B3GALT4O96024 378 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 CX3CR1P49238 355 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 AFF3P51826 1226 aaKnown RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 AVPI1Q5T686 147 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM164Q5U3C3 297 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 FAM71E1Q6IPT2 247 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 PAQR6Q6TCH4 344 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SPNS2Q8IVW8 549 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 HAS2Q92819 552 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 DDOQ99489 341 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 MS4A8Q9BY19 250 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF225Q9UK10 706 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 KDM4EB2RXH2 506 aaPredicted RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 FXYD1O00168 92 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SYT5O00445 386 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ADAM12O43184 909 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 MAKP20794 623 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 P2RY2P41231 377 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 HTR3AP46098 478 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF136P52737 540 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SAXO2Q658L1 398 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 OR4K15Q8NH41 348 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ST7LQ8TDW4 575 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM43Q9BTV4 400 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SLC46A2Q9BY10 475 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 IKZF5Q9H5V7 419 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 B4DXG7 233 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SURF4O15260 269 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 HTR2CP28335 458 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SFTPDP35247 375 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 NFATC4Q14934 902 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 LTB4RQ15722 352 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 DVL3Q92997 716 aaPredicted RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 AMDHD1Q96NU7 426 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 ADOQ96SZ5 270 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 NMNAT3Q96T66 252 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 SDHAF2Q9NX18 166 aa13.2□□□□□ -0.3
COL1A2-201ENST00000297268 MYO5AQ9Y4I1 1855 aaKnown RBP13.2□□□□□ -0.3
COL1A2-201ENST00000297268 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 H7C1C5 153 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 K7EPK0 472 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 LCN6P62502 163 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 PLA2G7Q13093 441 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 STEAP1BQ6NZ63 245 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 FAM71E2Q8N5Q1 922 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 DZANK1Q9NVP4 752 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 PLCH1Q4KWH8 1693 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SERPINE2P07093 398 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SLC7A9P82251 487 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 HEPHL1Q6MZM0 1159 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 RNF128Q8TEB7 428 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 LRRC46Q96FV0 321 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 INSM2Q96T92 566 aaPredicted RBP13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SLC19A3Q9BZV2 496 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 TCEAL2Q9H3H9 227 aaPredicted RBP13.19□□□□□ -0.3
COL1A2-201ENST00000297268 GPATCH2Q9NW75 528 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 E9PI62 339 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SOCS7O14512 581 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 PAPLNO95428 1278 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 IGFBP1P08833 259 aaPredicted RBP13.19□□□□□ -0.3
COL1A2-201ENST00000297268 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 DUSP6Q16828 381 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 CCSMST1Q4G0I0 132 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 HHATLQ9HCP6 504 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 TRIM64A6NGJ6 449 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 B4GALT3O60512 393 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 ATG12O94817 140 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 CPEP16870 476 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 SERPINA2P20848 420 aa13.19□□□□□ -0.3
COL1A2-201ENST00000297268 HSF5Q4G112 596 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms