RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SERTAD3Q9UJW9 196 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 TVP23AA6NH52 213 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ELOA3DA6NLF2 546 aaPredicted RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 PIAS2O75928 621 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 DDAH2O95865 285 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 PSKH1P11801 424 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 SNRPBP14678 240 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 SPI1P17947 270 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 RBM34P42696 430 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 SRP9P49458 86 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 AGFG1P52594 562 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 NXPH1P58417 271 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 IFITM2Q01629 132 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 ASAH1Q13510 395 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ELOA3BQ3SY89 546 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 DMKNQ6E0U4 476 aaPredicted RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 RPL13AP3Q6NVV1 102 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ARHGAP11AQ6P4F7 1023 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 LEG1Q6P5S2 330 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 RAB43Q86YS6 212 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 C9orf40Q8IXQ3 194 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ELOA3Q8NG57 546 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ST6GAL2Q96JF0 529 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 DDOQ99489 341 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 NPAS1Q99742 590 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 POLHQ9Y253 713 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 IGHV1OR21-1A0A087WYE8 117 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 OR7A10O76100 309 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 RPS5P46782 204 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 NR0B1P51843 470 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 NANOS3P60323 173 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 TBRG1Q3YBR2 411 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 STPG1Q5TH74 334 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 FAM69BQ5VUD6 431 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 SFXN4Q6P4A7 337 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 KANSL1Q7Z3B3 1105 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 IZUMO1Q8IYV9 350 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ZNF721Q8TF20 911 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 THAP3Q8WTV1 239 aaPredicted RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 TTYH2Q9BSA4 534 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 FKRPQ9H9S5 495 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 CTSFQ9UBX1 484 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 FBXL21Q9UKT6 434 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 ATXN7L1Q9ULK2 861 aaPredicted RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 ICAM5Q9UMF0 924 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 AK6Q9Y3D8 172 aaKnown RBP10.74□□□□□ -0.69
RHO-201ENST00000296271 N6AMT1Q9Y5N5 214 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 CACNA1EQ15878 2313 aa10.74□□□□□ -0.69
RHO-201ENST00000296271 RPP14O95059 124 aaKnown RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 UBL4AP11441 157 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 TACR3P29371 465 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 RPS11P62280 158 aaKnown RBP eCLIP10.73□□□□□ -0.69
RHO-201ENST00000296271 ZNF117Q03924 483 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 GRM7Q14831 915 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 ATG4DQ86TL0 474 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 SETD6Q8TBK2 473 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 THAP4Q8WY91 577 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 ABHD1Q96SE0 405 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 SLC22A4Q9H015 551 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 SLC25A18Q9H1K4 315 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 NEK6Q9HC98 313 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 RANGRFQ9HD47 186 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 NRIP3Q9NQ35 241 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 PLSCR3Q9NRY6 295 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 ACOD1A6NK06 481 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 EFCAB7A8K855 629 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 SC5DO75845 299 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 PLGP00747 810 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 IFNGP01579 166 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 ADRB1P08588 477 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 GIMD1P0DJR0 217 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 ATF1P18846 271 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 GDI2P50395 445 aaKnown RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 GPR143P51810 404 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 HNRNPKP61978 463 aaKnown RBP eCLIP10.73□□□□□ -0.69
RHO-201ENST00000296271 NSDHLQ15738 373 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.73□□□□□ -0.69
RHO-201ENST00000296271 ODF4Q2M2E3 257 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 LINC01590Q5TEZ4 76 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 TRIQKQ629K1 86 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 GPR135Q8IZ08 494 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 SNX33Q8WV41 574 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 TAAR8Q969N4 342 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 ADIPOR1Q96A54 375 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 UPRTQ96BW1 309 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 CNN2Q99439 309 aaKnown RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 LPAR4Q99677 370 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 TP63Q9H3D4 680 aaPredicted RBP10.73□□□□□ -0.69
RHO-201ENST00000296271 UBQLN4Q9NRR5 601 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 NCDNQ9UBB6 729 aa10.73□□□□□ -0.69
RHO-201ENST00000296271 FITM1A5D6W6 292 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms