RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ACTC1P68032 377 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ACTA1P68133 377 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 GALEQ14376 348 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 PCOLCEQ15113 449 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SF3A2Q15428 464 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 ZNF74Q16587 644 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ISXQ2M1V0 245 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 C11orf91Q3C1V1 193 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 LCN1P1Q5VSP4 162 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 PAPD4Q6PIY7 484 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 PRR23CQ6ZRP0 262 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 MARCH3Q86UD3 253 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 CENPSQ8N2Z9 138 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ZFP41Q8N8Y5 198 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 SDR9C7Q8NEX9 313 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ATP6V1C2Q8NEY4 427 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ELP5Q8TE02 316 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 NTNG2Q96CW9 530 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 CDC6Q99741 560 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 TM9SF2Q99805 663 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 KCNS3Q9BQ31 491 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 TPK1Q9H3S4 243 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 TRIM36Q9NQ86 728 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 PCDHGA1Q9Y5H4 931 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 ASCC3Q8N3C0 2202 aaKnown RBP8.33□□□□□ -1.08
PDPN-201ENST00000294489 ZNF318Q5VUA4 2279 aa8.33□□□□□ -1.08
PDPN-201ENST00000294489 IGHV3-20A0A0C4DH32 117 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TRDV1A0A1B0GX56 115 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 BLOC1S5-TXNDC5H3BN57 136 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 LRP3O75074 770 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CD63P08962 238 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CLUP10909 449 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 SLC2A5P22732 501 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CXCR1P25024 350 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MST1P26927 711 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 FGF9P31371 208 aaPredicted RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 CAPZA2P47755 286 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 RPS4XP62701 263 aaKnown RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 GPR50Q13585 617 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CBFBQ13951 182 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GPALPP1Q8IXQ4 340 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ARMC10Q8N2F6 343 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TMEM99Q8N816 258 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 SLC25A46Q96AG3 418 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ZNF524Q96C55 264 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 DEPDC7Q96QD5 511 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CMKLR1Q99788 373 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CRB3Q9BUF7 120 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 NRIP3Q9NQ35 241 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 YARS2Q9Y2Z4 477 aaKnown RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 RGS5O15539 181 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CDC40O60508 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDPN-201ENST00000294489 LALBAP00709 142 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MT-ND5P03915 603 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 HIST1H2ABP04908 130 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GYPBP06028 91 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MRPL3P09001 348 aaKnown RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 EVI2BP34910 448 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MXD1Q05195 221 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 EFR3AQ14156 821 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 PON3Q15166 354 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 CD200R1LQ6Q8B3 271 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 HIST3H2AQ7L7L0 130 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GLRX5Q86SX6 157 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 OR5W2Q8NH69 310 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 SMPDL3BQ92485 455 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 HIST1H2ACQ93077 130 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 IMMP1LQ96LU5 166 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GPX7Q96SL4 187 aaPredicted RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 LPAR4Q99677 370 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MED18Q9BUE0 208 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TMED9Q9BVK6 235 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ADGRL4Q9HBW9 690 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MMP25Q9NPA2 562 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 FAIMQ9NVQ4 179 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TBCCD1Q9NVR7 557 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ASB6Q9NWX5 421 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 HIF3AQ9Y2N7 669 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 ADAM18Q9Y3Q7 739 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 B3GALT1Q9Y5Z6 326 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 IGHV1-45A0A0A0MS14 117 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GMFGO60234 142 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 SLC25A12O75746 678 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 KLK3P07288 261 aaPredicted RBP8.32□□□□□ -1.08
PDPN-201ENST00000294489 RAB40ALP0C0E4 278 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 GP1BBP13224 206 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 TAS2R43P59537 309 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 FABP5Q01469 135 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MISPQ8IVT2 679 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 POMGNT2Q8NAT1 580 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 MINDY2Q8NBR6 621 aa8.32□□□□□ -1.08
PDPN-201ENST00000294489 KATNB1Q9BVA0 655 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms