RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 MED17Q9NVC6 651 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 A0A1W2PPC4 97 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 B4DXG7 233 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 H3BML4 177 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 PITPNBP48739 271 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 PSMD4P55036 377 aaKnown RBP10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 VASH1Q7L8A9 365 aaPredicted RBP10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 KANSL1Q7Z3B3 1105 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 CEP76Q8TAP6 659 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 TSPAN10Q9H1Z9 355 aaPredicted RBP10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 SYT4Q9H2B2 425 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 FZD7O75084 574 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 SERPINA3P01011 423 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 GP1BBP13224 206 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 FBLP22087 321 aaKnown RBP10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 RORAP35398 523 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 CCR6P51684 374 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 TAS2R43P59537 309 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 HNRNPKP61978 463 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■■■■ 35.4
SLC13A3-201ENST00000279027 GALEQ14376 348 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 ZNF613Q6PF04 617 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 LNX2Q8N448 690 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 ASCC1Q8N9N2 400 aaKnown RBP10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 OR5H6Q8NGV6 325 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 OR8S1Q8NH09 359 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 PSD2Q9BQI7 771 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 NOX4Q9NPH5 578 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 TMEM138Q9NPI0 162 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 POMT2Q9UKY4 750 aa10.89□□□□□ -0.67
SLC13A3-201ENST00000279027 SLC19A2O60779 497 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ACTC1P68032 377 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ACTA1P68133 377 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 CDC20Q12834 499 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 HEPHL1Q6MZM0 1159 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 GPBAR1Q8TDU6 330 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 JSRP1Q96MG2 331 aaPredicted RBP10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SERTAD3Q9UJW9 196 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 LOC100509620A0A075B734 347 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SRPX2O60687 465 aaPredicted RBP10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 CFIP05156 583 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 POU2F2P09086 479 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 RFX2P48378 723 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SIRPAP78324 504 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SNTB2Q13425 540 aaKnown RBP10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 GARNL3Q5VVW2 1013 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 BICRALQ6AI39 1079 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 FCRLAQ7L513 359 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 POGLUT1Q8NBL1 392 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 TCTN2Q96GX1 697 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ADAM11O75078 769 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 PPM1BO75688 479 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 UTS2O95399 124 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SYPP08247 313 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 MAGEA8P43361 318 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 EVX1P49640 407 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 CHMP1BQ7LBR1 199 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ZNF595Q8IYB9 648 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SDR16C5Q8N3Y7 309 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 MS4A15Q8N5U1 240 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 SETD6Q8TBK2 473 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 LGALS14Q8TCE9 139 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ZPLD1Q8TCW7 415 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 DUSP19Q8WTR2 217 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 OR10A4Q9H209 315 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 DPAGT1Q9H3H5 408 aa10.88□□□□□ -0.67
SLC13A3-201ENST00000279027 ZNF879B4DU55 563 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 ETV6P41212 452 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 SNTA1Q13424 505 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 PHF19Q5T6S3 580 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 LRFN4Q6PJG9 635 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 SIX5Q8N196 739 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 BRIX1Q8TDN6 353 aaKnown RBP10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 DNAJA4Q8WW22 397 aaPredicted RBP10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 DERL3Q96Q80 235 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 RNF32Q9H0A6 362 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 UBQLN4Q9NRR5 601 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 DNAJB12Q9NXW2 375 aaKnown RBP10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 A0A087WV62 115 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 A0A0B4J2E0 115 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 A0A1B0GX12 115 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 ITGA10O75578 1167 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 GNALP38405 381 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 ARRB1P49407 418 aaPredicted RBP10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 MELKQ14680 651 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 SLC25A25Q6KCM7 469 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 KRT77Q7Z794 578 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 GPAT4Q86UL3 456 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 FUZQ9BT04 418 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 ING4Q9UNL4 249 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 GPR179Q6PRD1 2367 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 TP53BP1Q12888 1972 aaPredicted RBP10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 ZNF264O43296 627 aa10.87□□□□□ -0.67
SLC13A3-201ENST00000279027 OIP5O43482 229 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms