RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 C2CD4DB7Z1M9 353 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 E5RGE8 158 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 H0YL77 283 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 INSIG1O15503 277 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 DENRO43583 198 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 SNAI2O43623 268 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SH3BGRLO75368 114 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ETHE1O95571 254 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 IFNA6P05013 189 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GPIP06744 558 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ANXA5P08758 320 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GSTT2P0CG29 244 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GSTT2BP0CG30 244 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SLC35E2BP0CK96 405 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SLC35E2P0CK97 266 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SMIM10L1P0DMW3 83 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PSKH1P11801 424 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ARSBP15848 533 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 TBXA2RP21731 343 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 TEAD1P28347 426 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CD1CP29017 333 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ID1P41134 155 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SLC1A2P43004 574 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 KIR3DL2P43630 455 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 RGRP47804 291 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PPP3CCP48454 512 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SERPINB9P50453 376 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CCR8P51685 355 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 VAMP7P51809 220 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 EFNB2P52799 333 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GTF2BQ00403 316 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CHRNB3Q05901 458 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 C1orf61Q13536 156 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 KPNB1Q14974 876 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 CYTH1Q15438 398 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PSMD5Q16401 504 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GPR33Q49SQ1 333 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 RAB6CQ53S08 254 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 STUMQ69YW2 141 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 UNQ6126/PRO20091Q6UXV3 157 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CEACAM20Q6UY09 585 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 HDDC2Q7Z4H3 204 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 BCDIN3DQ7Z5W3 292 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 GPBP1Q86WP2 473 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 UEVLDQ8IX04 471 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CLEC4FQ8N1N0 589 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ZNF786Q8N393 782 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PRSS35Q8N3Z0 413 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ARFGAP1Q8N6T3 406 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 NOA1Q8NC60 698 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 NECAP1Q8NC96 275 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 NPEPL1Q8NDH3 523 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 STXBP6Q8NFX7 210 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 OR5M1Q8NGP8 315 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 OR14A16Q8NHC5 309 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 FCAMRQ8WWV6 532 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 HSD17B8Q92506 261 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 TSACCQ96A04 125 aaPredicted RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 RAD51AP1Q96B01 352 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SMIM10Q96HG1 83 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 MACROD1Q9BQ69 325 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 CCDC3Q9BQI4 270 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ZNF251Q9BRH9 671 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SRRQ9GZT4 340 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 LHPPQ9H008 270 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 TOLLIPQ9H0E2 274 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 RAB6CQ9H0N0 254 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 FAM234AQ9H0X4 552 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SDCBP2Q9H190 292 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 WDR55Q9H6Y2 383 aaPredicted RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 VIPAS39Q9H9C1 493 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 UGT1A10Q9HAW8 530 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 C1orf123Q9NWV4 160 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ABCD2Q9UBJ2 740 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 LNPEPQ9UIQ6 1025 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 UBQLN1Q9UMX0 589 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 NSG2Q9Y328 171 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ZNF175Q9Y473 711 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 YIPF1Q9Y548 306 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ETV7Q9Y603 341 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 GBF1Q92538 1859 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SIP14410 1827 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 COL6A3P12111 3177 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ARHGEF17Q96PE2 2063 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 LRRN3E7EW58 273 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 OR7A17O14581 309 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MID1O15344 667 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RFPL2O75678 378 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 CD59P13987 128 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ST6GAL1P15907 406 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 TACR3P29371 465 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MATKP42679 507 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 HTR5AP47898 357 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RFX3P48380 749 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 NOVA1P51513 510 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 TAS2R38P59533 333 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RAB10P61026 200 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms