RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 LIMS4P0CW20 117 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 APEHP13798 732 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 AQP2P41181 271 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 RPS15P62841 145 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 C1DQ13901 141 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 TMEM81Q6P7N7 255 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 OPN5Q6U736 354 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 STK35Q8TDR2 534 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 RPL3LQ92901 407 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 CPNE5Q9HCH3 593 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 CHCHD3Q9NX63 227 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 PPP4R1LQ9P1A2 415 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 BLOC1S5-TXNDC5H3BN57 136 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 CCRL2O00421 344 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 TP53I11O14683 189 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 PAICSP22234 425 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 GADD45AP24522 165 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 OTX2P32243 289 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 TSTQ16762 297 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 STPG1Q5TH74 334 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 C1QL3Q5VWW1 255 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 ATCAYQ86WG3 371 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 CYB561A3Q8NBI2 242 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 OR52E2Q8NGJ4 325 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 TEAD3Q99594 435 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 ZNF649Q9BS31 505 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 KATNB1Q9BVA0 655 aa20.01■□□□□ 0.79
CCDC7-201ENST00000277657 RYDENQ9NUL5 291 aaKnown RBP20.01■□□□□ 0.79
CCDC7-201ENST00000277657 KNTC1P50748 2209 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 BCL10O95999 233 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 MT-ATP6P00846 226 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 ICAM2P13598 275 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 LIMK1P53667 647 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 VBP1P61758 197 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 SNTA1Q13424 505 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 SSX1Q16384 188 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 ALG10Q5BKT4 473 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 C5orf46Q6UWT4 87 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 SIRT6Q8N6T7 355 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 PSD4Q8NDX1 1056 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 OR4K13Q8NH42 304 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 FRMD6Q96NE9 622 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 DDOQ99489 341 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 TNFRSF10DQ9UBN6 386 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 SLC6A5Q9Y345 797 aa20■□□□□ 0.79
CCDC7-201ENST00000277657 CUL9Q8IWT3 2517 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 TERTO14746 1132 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 AIREO43918 545 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 HPP00738 406 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 CD14P08571 375 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 WNT4P56705 351 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 MLF1P58340 268 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NCS1P62166 190 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 LSM3P62310 102 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 ERVK-25P63136 954 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 MLLT11Q13015 90 aaPredicted RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 KLHL12Q53G59 568 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 FAM69AQ5T7M9 428 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 C1orf140Q5VVS0 124 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 ARSKQ6UWY0 536 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 FAM122BQ7Z309 247 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NANOGNBQ7Z5D8 188 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 RPS19BP1Q86WX3 136 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 DND1Q8IYX4 353 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 FAM98AQ8NCA5 519 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 ZNF485Q8NCK3 441 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 SDR9C7Q8NEX9 313 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 SECISBP2Q96T21 854 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 CDCP1Q9H5V8 836 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 HAO2Q9NYQ3 351 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 CPAMD8Q8IZJ3 1885 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 C21orf140B9A014 251 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 CLUP10909 449 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 APOBEC1P41238 236 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 SSR4P51571 173 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 RPL18Q07020 188 aaKnown RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 CHAF1BQ13112 559 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 DNASE1L3Q13609 305 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 SLC25A53Q5H9E4 307 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 B3GLCTQ6Y288 498 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NPEPL1Q8NDH3 523 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NLGN4YQ8NFZ3 816 aaPredicted RBP19.99■□□□□ 0.79
CCDC7-201ENST00000277657 OR51G2Q8NGK0 314 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NDNFQ8TB73 568 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 NPAS1Q99742 590 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 GPR87Q9BY21 358 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 B3GNT4Q9C0J1 378 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 OR51V1Q9H2C8 321 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 KLHL1Q9NR64 748 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 FBXL4Q9UKA2 621 aa19.99■□□□□ 0.79
CCDC7-201ENST00000277657 IMPA2O14732 288 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 TXNDC12O95881 172 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 HIST1H2ABP04908 130 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 ATP6V1E1P36543 226 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 Q0VFX4 171 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 OR2G6Q5TZ20 316 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 IL20RBQ6UXL0 311 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 HIST3H2AQ7L7L0 130 aa19.98■□□□□ 0.79
CCDC7-201ENST00000277657 MAMDC2Q7Z304 686 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms