RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A075B6Q4 140 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 TRDV1A0A1B0GX56 115 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 OR6C68A6NDL8 312 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 LDOC1O95751 146 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 NUDT14O95848 222 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 CD14P08571 375 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 NAGAP17050 411 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 CELP19835 753 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 CXCR1P25024 350 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 FAM69BQ5VUD6 431 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 FAM199XQ6PEV8 388 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 OR5L2Q8NGL0 311 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 FKRPQ9H9S5 495 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 SLC6A5Q9Y345 797 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 PCDHGB2Q9Y5G2 931 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 COL27A1Q8IZC6 1860 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 WDFY4Q6ZS81 3184 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 B4DXG7 233 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 IMPA2O14732 288 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 IL1AP01583 271 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 BGLAPP02818 100 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 ZNF12P17014 697 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 RPS5P46782 204 aaKnown RBP15.1■□□□□ 0.01
CCDC40-201ENST00000269318 POLR2HP52434 150 aaKnown RBP15.1■□□□□ 0.01
CCDC40-201ENST00000269318 IFITM3Q01628 133 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 COL28A1Q2UY09 1125 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 CRTC2Q53ET0 693 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-201ENST00000269318 ALG10Q5BKT4 473 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 FAM198BQ6UWH4 519 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 Q6ZNX1 250 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 ATP6V1C2Q8NEY4 427 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 SMAP2Q8WU79 429 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-201ENST00000269318 ZNRF4Q8WWF5 429 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 Q96M85 177 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 PTDSS2Q9BVG9 487 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 QPCTLQ9NXS2 382 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 ZMIZ1Q9ULJ6 1067 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 PEX16Q9Y5Y5 336 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 MPDZO75970 2070 aa15.1■□□□□ 0.01
CCDC40-201ENST00000269318 WDR87Q6ZQQ6 2873 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TRAV36DV7A0A075B6V5 113 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 LOC102723996A0A087X1L8 192 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TEX13CA0A0J9YWL9 993 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 NPIPB7O75200 414 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SULT1C4O75897 302 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ZFAND5O76080 213 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TXNDC12O95881 172 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ACTC1P68032 377 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ACTA1P68133 377 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 RPL18Q07020 188 aaKnown RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 GPR50Q13585 617 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ANGPT1Q15389 498 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 C1QL3Q5VWW1 255 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TUBA3EQ6PEY2 450 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 LYPD8Q6UX82 237 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ZNF517Q6ZMY9 492 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 GRINAQ7Z429 371 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ZMYND19Q96E35 227 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 KCTD7Q96MP8 289 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 DCLRE1CQ96SD1 692 aaKnown RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 MED18Q9BUE0 208 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 NUAK2Q9H093 628 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SNTG1Q9NSN8 517 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ASB6Q9NWX5 421 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TAS2R10Q9NYW0 307 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 MYOTQ9UBF9 498 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SIRT4Q9Y6E7 314 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 BDP1A6H8Y1 2624 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 A0A1W2PQL4 384 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TAF4O00268 1085 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 CDRT1O95170 752 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TFP02787 698 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 KLK3P07288 261 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 GAAP10253 952 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SPI1P17947 270 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 CD40LGP29965 261 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SDHAP31040 664 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 CDKN2AP42771 156 aaKnown RBP15.09■□□□□ 0.01
CCDC40-201ENST00000269318 DIO1P49895 249 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 RORCP51449 518 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 PPP5CP53041 499 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 CTXN1P60606 82 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TBC1D25Q3MII6 688 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SLC35D3Q5M8T2 416 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 POMZP3Q6PJE2 187 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 NANOGNBQ7Z5D8 188 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 ADGRG3Q86Y34 549 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 POMGNT2Q8NAT1 580 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SYT14Q8NB59 555 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 OR51L1Q8NGJ5 315 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 SLC25A46Q96AG3 418 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TMCO6Q96DC7 493 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 COQ7Q99807 217 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 RERGLQ9H628 205 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 PCDHGB6Q9Y5F9 930 aa15.09■□□□□ 0.01
CCDC40-201ENST00000269318 TMED7-TICAM2A0A0A6YYA0 188 aa15.08■□□□□ 0
CCDC40-201ENST00000269318 TMEM72A0PK05 275 aa15.08■□□□□ 0
CCDC40-201ENST00000269318 C4orf47A7E2U8 309 aa15.08■□□□□ 0
CCDC40-201ENST00000269318 SUSD5O60279 629 aa15.08■□□□□ 0
CCDC40-201ENST00000269318 MT-ND5P03915 603 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms