RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CDCP1Q9H5V8 836 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 FKRPQ9H9S5 495 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 SDHAF3Q9NRP4 125 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 KLHL21Q9UJP4 597 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 FBXL4Q9UKA2 621 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 VDAC3Q9Y277 283 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 EXOGQ9Y2C4 368 aaKnown RBP10.49□□□□□ -0.73
SCAF11-201ENST00000266589 YARS2Q9Y2Z4 477 aaKnown RBP10.49□□□□□ -0.73
SCAF11-201ENST00000266589 EXOSC1Q9Y3B2 195 aaKnown RBP10.49□□□□□ -0.73
SCAF11-201ENST00000266589 PCDHGB6Q9Y5F9 930 aa10.49□□□□□ -0.73
SCAF11-201ENST00000266589 CHCHD2Q9Y6H1 151 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-201ENST00000266589 PCSK5Q92824 1860 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 OTOGLQ3ZCN5 2332 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 IGLV3-32A0A0A0MS00 114 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SLC22A31A6NKX4 558 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 A8MVM7 634 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 M0R3G1 203 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ARPC3O15145 178 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SLC22A1O15245 554 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TNFSF15O95150 251 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 BCL10O95999 233 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 HPP00738 406 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 HIST1H2ABP04908 130 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 CLUP10909 449 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 CDK4P11802 303 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 GADD45AP24522 165 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 MSX1P28360 303 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 UQCRC1P31930 480 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 DLSTP36957 453 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SSR4P51571 173 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 VBP1P61758 197 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 NCS1P62166 190 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ERVK-25P63136 954 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 RPL18Q07020 188 aaKnown RBP10.48□□□□□ -0.73
SCAF11-201ENST00000266589 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.48□□□□□ -0.736e-7■■■■□ 21.5
SCAF11-201ENST00000266589 FOXF1Q12946 379 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ALG10Q5BKT4 473 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 HIST3H2AQ7L7L0 130 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 RPS19BP1Q86WX3 136 aaKnown RBP10.48□□□□□ -0.73
SCAF11-201ENST00000266589 LRRC75AQ8NAA5 344 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 HIST1H2ACQ93077 130 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 KISS1RQ969F8 398 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-201ENST00000266589 RASD2Q96D21 266 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 PTDSS2Q9BVG9 487 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 RACGAP1Q9H0H5 632 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TNFRSF10DQ9UBN6 386 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TMEM129A0AVI4 362 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 CCDC182A6NF36 153 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 CCRL2O00421 344 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 AIREO43918 545 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 NPIPB7O75200 414 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SERPINI2O75830 405 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SCG5P05408 212 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 LIMS3P0CW19 117 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 LIMS4P0CW20 117 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ICAM2P13598 275 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SLC2A5P22732 501 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 F8A1P23610 371 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ZNF41P51814 821 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-201ENST00000266589 INPP5JQ15735 1006 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ANKDD1AQ495B1 522 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 ARMC4Q5T2S8 1044 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 OR2G6Q5TZ20 316 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 PRAMEF20Q5VT98 475 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 C1orf140Q5VVS0 124 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 LHFPL3Q86UP9 236 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 PSD4Q8NDX1 1056 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 OR9Q1Q8NGQ5 310 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 NDNFQ8TB73 568 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 SLC25A36Q96CQ1 311 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TEAD3Q99594 435 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 OR11A1Q9GZK7 315 aa10.48□□□□□ -0.73
SCAF11-201ENST00000266589 TEX13CA0A0J9YWL9 993 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 SPAARA0A1B0GVQ0 90 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 C21orf140B9A014 251 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 IDH3BO43837 385 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 MT-ATP6P00846 226 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 IGHA1P01876 353 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 F13BP05160 661 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 GYPBP06028 91 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 CD14P08571 375 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 FTH1P19P0C7X4 201 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 APOBEC1P41238 236 aaKnown RBP10.47□□□□□ -0.73
SCAF11-201ENST00000266589 WNT4P56705 351 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 MLF1P58340 268 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 CTXN1P60606 82 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 Q0VFX4 171 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 IL10RAQ13651 578 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 SSX1Q16384 188 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 FAM69AQ5T7M9 428 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 MAMDC2Q7Z304 686 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-201ENST00000266589 TMEM156Q8N614 296 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 STK35Q8TDR2 534 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 RELTQ969Z4 430 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 SECISBP2Q96T21 854 aaKnown RBP10.47□□□□□ -0.73
SCAF11-201ENST00000266589 NMNAT3Q96T66 252 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 GPR87Q9BY21 358 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 NDEL1Q9GZM8 345 aa10.47□□□□□ -0.73
SCAF11-201ENST00000266589 CPNE5Q9HCH3 593 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms