RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CENPAP49450 140 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.59
CHMP3-201ENST00000263856 HTR4Q13639 388 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 FGD2Q7Z6J4 655 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 TMPRSS12Q86WS5 348 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 OR2L13Q8N349 312 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 OR52R1Q8NGF1 315 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 SMIM4Q8WVI0 70 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 FCAMRQ8WWV6 532 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 CXorf58Q96LI9 332 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 HDAC8Q9BY41 377 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 SLC17A9Q9BYT1 436 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.59
CHMP3-201ENST00000263856 NRIP3Q9NQ35 241 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 KCMF1Q9P0J7 381 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 NUP50Q9UKX7 468 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 NPFFR2Q9Y5X5 522 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 HEATR5AQ86XA9 2040 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 SIGLEC5O15389 551 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ATP1B1P05026 303 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 MAZP56270 477 aaKnown RBP11.39□□□□□ -0.59
CHMP3-201ENST00000263856 SIGLEC14Q08ET2 396 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 UBE2NLQ5JXB2 153 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 FBXO42Q6P3S6 717 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF613Q6PF04 617 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 PARGQ86W56 976 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 SFTPA2Q8IWL1 248 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ZDHHC1Q8WTX9 485 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 FGF13Q92913 245 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
CHMP3-201ENST00000263856 RERGQ96A58 199 aaPredicted RBP11.39□□□□□ -0.59
CHMP3-201ENST00000263856 LMAN2LQ9H0V9 348 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 MCCC2Q9HCC0 563 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 TCF7L1Q9HCS4 588 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF879B4DU55 563 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 GALP22466 123 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 MAP2K6P52564 334 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 FAM53BQ14153 422 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ERV3-1Q14264 604 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 STPG1Q5TH74 334 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 FRMD1Q8N878 549 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 APOOQ9BUR5 198 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 ULBP3Q9BZM4 244 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
CHMP3-201ENST00000263856 TSPAN9O75954 239 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 GJA4P35212 333 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 RPS15AP62244 130 aaKnown RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 GAB4Q2WGN9 574 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 RNF113BQ8IZP6 322 aaKnown RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ZBTB44Q8NCP5 570 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 PMEPA1Q969W9 287 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF707Q96C28 371 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 LINC00052Q96N35 136 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CCDC3Q9BQI4 270 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ARL6Q9H0F7 186 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 KCNK15Q9H427 330 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 IGFLR1Q9H665 355 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 NCDNQ9UBB6 729 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 SPACA6W5XKT8 324 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CHD9Q3L8U1 2897 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 SEC16AO15027 2179 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TMEM72A0PK05 275 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ACSM4P0C7M7 580 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CDK2P24941 298 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 MELKQ14680 651 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF542PQ5EBM4 170 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ZNF425Q6IV72 752 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 RPL13AP3Q6NVV1 102 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 LEG1Q6P5S2 330 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 PAQR7Q86WK9 346 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 METTL27Q8N6F8 245 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CDRT4Q8N9R6 151 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TOR1AIP2Q8NFQ8 470 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 S100A16Q96FQ6 103 aaKnown RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 OR1F2PQ96R84 312 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CDV3Q9UKY7 258 aaKnown RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ARID1AO14497 2285 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CREBL2O60519 120 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 RDH16O75452 317 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 KDM4BO94953 1096 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 THBS1P07996 1170 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 CLLU1Q5K131 121 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 FIGLAQ6QHK4 219 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 KIRREL2Q6UWL6 708 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TMPRSS11FQ6ZWK6 438 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms