RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 C9orf43Q8TAL5 461 aaPredicted RBP8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 STK35Q8TDR2 534 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 UBE2FQ969M7 185 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 DDIT4LQ96D03 193 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC19A3Q9BZV2 496 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 MCCC2Q9HCC0 563 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 KRCC1Q9NPI7 259 aaPredicted RBP8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 C8orf4Q9NR00 106 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 NANSQ9NR45 359 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 AASSQ9UDR5 926 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 SIGLEC7Q9Y286 467 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 B3GNT3Q9Y2A9 372 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 TMEM5Q9Y2B1 443 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 MRPS18CQ9Y3D5 142 aaKnown RBP8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 PCDHGB6Q9Y5F9 930 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 PCDHGB5Q9Y5G0 923 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 ITPR1Q14643 2758 aa8.76□□□□□ -1.01
SNRNP40-201ENST00000263694 SPENQ96T58 3664 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 KIAA1549Q9HCM3 1950 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 A0A0J9YW62 118 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 LIPT2A6NK58 231 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 FTCDNL1E5RQL4 147 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 TNFSF11O14788 317 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 TFECO14948 347 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 SEC14L5O43304 696 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF208O43345 1280 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 AHSA1O95433 338 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ASAH2BP0C7U1 165 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF17P17021 662 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF24P17028 368 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 BMP7P18075 431 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 GSTM3P21266 225 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 GRPRP30550 384 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 CAPGP40121 348 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 AQP2P41181 271 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 MLLT10P55197 1068 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 CLDN15P56746 228 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 OR2B6P58173 313 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 RAC1P63000 192 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 SRYQ05066 204 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 DBPQ10586 325 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 COX10Q12887 443 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 PTGES3Q15185 160 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 C3AR1Q16581 482 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZBED5Q49AG3 693 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 CMPK2Q5EBM0 449 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ACSM5Q6NUN0 579 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 PLXDC2Q6UX71 529 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF620Q6ZNG0 422 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 RASSF6Q6ZTQ3 369 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 KDM8Q8N371 416 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 FAM109AQ8N4B1 249 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 FAM98AQ8NCA5 519 aaKnown RBP8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 TFAP2CQ92754 450 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF570Q96NI8 536 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 GRIP2Q9C0E4 1043 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 ADNPQ9H2P0 1102 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 OR52D1Q9H346 318 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 LDAHQ9H6V9 325 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 PRDM4Q9UKN5 801 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 LRRC42Q9Y546 428 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 PCDHGB7Q9Y5F8 929 aa8.75□□□□□ -1.01
SNRNP40-201ENST00000263694 IGHV3-15A0A0B4J1V0 119 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 LOC100130705A0A1B0GUX0 176 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF814B7Z6K7 855 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 NPIPA5E9PKD4 350 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 E9PQ18 207 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 C11orf98E9PRG8 122 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 M0R082 166 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ACOT7O00154 380 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 SULT2B1O00204 365 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 EIF1AYO14602 144 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 AKR7A3O95154 331 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 POU3F2P20265 443 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ELK4P28324 431 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 IDUAP35475 653 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 DIO1P49895 249 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 HSF1Q00613 529 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 GINS1Q14691 196 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 TAF11Q15544 211 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 RFX4Q33E94 735 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 FAM69AQ5T7M9 428 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 GGNQ86UU5 652 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 CCDC71Q8IV32 467 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 PARP8Q8N3A8 854 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 Q8NA96 180 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF555Q8NEP9 628 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 OR4Q3Q8NH05 313 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 FANK1Q8TC84 345 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 CNBD2Q96M20 576 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 MUS81Q96NY9 551 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 TSSK6Q9BXA6 273 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 POTEKPQ9BYX7 375 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 EXO5Q9H790 373 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms