RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ATP6V1G2-DDX39BF2Z307 99 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 FGF17O60258 216 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 LINC00271P0C7V0 271 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 TMIGD3P0DMS9 266 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 NFYAP23511 347 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 CTNNB1P35222 781 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 NUP62P37198 522 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-201ENST00000262213 IKZF1Q13422 519 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 ZMYND11Q15326 602 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 VITQ6UXI7 678 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 TMEM52Q8NDY8 209 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 OR10G6Q8NH81 332 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 RAB7BQ96AH8 199 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 KCNMB2Q9Y691 235 aa16.04■□□□□ 0.16
TRAM1-201ENST00000262213 FXYD6-FXYD2A0A087WZ82 144 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 TCRBV16S1A1N1A0A5B0 115 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 GABARAPH6UMI1 98 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 TRIM77I1YAP6 450 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 CTDSPLO15194 276 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 B3GALT2O43825 422 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 CT62P0C5K7 136 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 OR2T7P0C7T2 308 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 PRMT2P55345 433 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ACTA2P62736 377 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ACTG2P63267 376 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 POU4F2Q12837 409 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 SGCGQ13326 291 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 PON3Q15166 354 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ODF4Q2M2E3 257 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 NHLRC3Q5JS37 347 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 RPL22L1Q6P5R6 122 aaKnown RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 GLDNQ6ZMI3 551 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 HDDC2Q7Z4H3 204 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 OR6M1Q8NGM8 313 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 OR2T27Q8NH04 317 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 SARGQ9BW04 601 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 FXYD6Q9H0Q3 95 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ZC4H2Q9NQZ6 224 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 C19orf53Q9UNZ5 99 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 PLSCR5A0PG75 271 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 CREBL2O60519 120 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 PRAF2O60831 178 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 CDK2P24941 298 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 P2RX1P51575 399 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 NANOS3P60323 173 aaKnown RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 NDUFAF6Q330K2 333 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 RASD2Q96D21 266 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 S100A16Q96FQ6 103 aaKnown RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ZCCHC4Q9H5U6 513 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 HAO2Q9NYQ3 351 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 AKAP7Q9P0M2 348 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-201ENST00000262213 DAPP1Q9UN19 280 aa16.03■□□□□ 0.16
TRAM1-201ENST00000262213 ARID1BQ8NFD5 2236 aaPredicted RBP16.02■□□□□ 0.16
TRAM1-201ENST00000262213 KNL1Q8NG31 2342 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 SLC31A1O15431 190 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 CTSVO60911 334 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 ECDO95905 644 aaPredicted RBP16.02■□□□□ 0.16
TRAM1-201ENST00000262213 RLN1P04808 185 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 RPS4Y1P22090 263 aaKnown RBP16.02■□□□□ 0.16
TRAM1-201ENST00000262213 DPP4P27487 766 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 ADH7P40394 386 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 TSFMP43897 325 aaKnown RBP16.02■□□□□ 0.16
TRAM1-201ENST00000262213 PTH2RP49190 550 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 AP3S2P59780 193 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 MELKQ14680 651 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 FBXO42Q6P3S6 717 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 OR5M1Q8NGP8 315 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 OR8K3Q8NH51 312 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 ST8SIA4Q92187 359 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 KLHL15Q96M94 604 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 REG4Q9BYZ8 158 aa16.02■□□□□ 0.16
TRAM1-201ENST00000262213 A0A0B4J2E0 115 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 A0A1B0GX12 115 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 LPLP06858 475 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 PLA2G7Q13093 441 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 CST6Q15828 149 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 HYAL4Q2M3T9 481 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 ARSKQ6UWY0 536 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 OR4N2Q8NGD1 307 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 TRPV4Q9HBA0 871 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 NTMQ9P121 344 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 OR5V1Q9UGF6 321 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 FOXJ3Q9UPW0 622 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 V9GY05 133 aa16.02■□□□□ 0.15
TRAM1-201ENST00000262213 MEIS3P1A6NDR6 274 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 PRR32B1ATL7 298 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 AIPO00170 330 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 ZFPL1O95159 310 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 ERVK-25P63136 954 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 SRSF5Q13243 272 aaKnown RBP16.01■□□□□ 0.15
TRAM1-201ENST00000262213 FHL1Q13642 323 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 NNATQ16517 81 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 C2orf68Q2NKX9 166 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 FAM78AQ5JUQ0 283 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 SEZ6L2Q6UXD5 910 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 CFAP77Q6ZQR2 320 aa16.01■□□□□ 0.15
TRAM1-201ENST00000262213 OR6V1Q8N148 313 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms