RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SPEM1Q8N4L4 309 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 C8orf44Q96CB5 159 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 STACQ99469 402 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 A0A1W2PRG6 482 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 SCDO00767 359 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC30A4O14863 429 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 IGLV3-19P01714 112 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 PYCR1P32322 319 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 GZMKP49863 264 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 PRAMEF8Q5VWM4 474 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 PRAMEF7Q5VXH5 474 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 OR8H3Q8N146 312 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 OR13C5Q8NGS8 318 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ZFAND1Q8TCF1 268 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 WDFY2Q96P53 400 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 C1QTNF6Q9BXI9 259 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 DIMT1Q9UNQ2 313 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 MCIDASD6RGH6 385 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 THBS1P07996 1170 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 IL12BP29460 328 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 GPR3P46089 330 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 MLLT11Q13015 90 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 FAM205BPQ63HN1 556 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 PLXDC1Q8IUK5 500 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 KDM8Q8N371 416 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 EID2Q8N6I1 236 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 NECAB3Q96P71 396 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF304Q9HCX3 659 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 SPEF1Q9Y4P9 236 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 E9PI62 339 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 RPP14O95059 124 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 RCBTB2O95199 551 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 HIST1H1CP16403 213 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 ERP29P30040 261 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 SRP9P49458 86 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 ATP12AP54707 1039 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 POU4F3Q15319 338 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 TOMM34Q15785 309 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 PXDC1Q5TGL8 231 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 GDPD1Q8N9F7 314 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 PTPMT1Q8WUK0 201 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 PTP4A1Q93096 173 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 OR6C1Q96RD1 312 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 ALG8Q9BVK2 526 aa13.41□□□□□ -0.26
TRAFD1-201ENST00000257604 SHISA3A0PJX4 238 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 SERINC4A6NH21 518 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 HMGN1P05114 100 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 TBXA2RP21731 343 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 PSMB10P40306 273 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 AQP2P41181 271 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 ACAA2P42765 397 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 OR12D2P58182 307 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 TEKQ02763 1124 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 RAB40BQ12829 278 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 TCTE1Q5JU00 501 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 KLHL36Q8N4N3 616 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC2A12Q8TD20 617 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 RTN4RQ9BZR6 473 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 PPIL3Q9H2H8 161 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 NARFLQ9H6Q4 476 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 MKKSQ9NPJ1 570 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 PTPRZ1P23471 2315 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 LYRM1O43325 122 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 ICOSLGO75144 302 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 PAHP00439 452 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 PIPP12273 146 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 MAGEB1P43366 347 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 BCL2L15Q5TBC7 163 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 C1QL3Q5VWW1 255 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 LAMTOR1Q6IAA8 161 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 POGLUT1Q8NBL1 392 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 ZPLD1Q8TCW7 415 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 APMAPQ9HDC9 416 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 NKIRAS2Q9NYR9 191 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 STMN3Q9NZ72 180 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 TESQ9UGI8 421 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 GTF2A1LQ9UNN4 478 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 SIGLEC7Q9Y286 467 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 NOS1APO75052 506 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 WISP1O95388 367 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 IL1AP01583 271 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 EFNA3P52797 238 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 GDPGP1Q6ZNW5 385 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 MOSPD2Q8NHP6 518 aa13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 AKIRIN1Q9H9L7 192 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-201ENST00000257604 TP53BP1Q12888 1972 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 A0A1B0GX12 115 aa13.39□□□□□ -0.27
TRAFD1-201ENST00000257604 LANCL1O43813 399 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms