RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ZNF337Q9Y3M9 751 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 U3KQ87 197 aa17.16■□□□□ 0.34
CPSF3-201ENST00000238112 A0A087WUJ7 227 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ANKRD61A6NGH8 418 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 GPR171O14626 319 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SERPINI2O75830 405 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 CSTAP01040 98 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 AKT2P31751 481 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 UQCRC1P31930 480 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 PSMD4P55036 377 aaKnown RBP17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ARPC4P59998 168 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 GXYLT1Q4G148 440 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ESCO2Q56NI9 601 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 HES5Q5TA89 166 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 UNQ9370/PRO34162Q6UXP9 181 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 Q6ZSR6 202 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 C7orf61Q8IZ16 206 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 RCBTB1Q8NDN9 531 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 MRGPRX1Q96LB2 322 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SLC25A18Q9H1K4 315 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 C20orf85Q9H1P6 137 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ELF5Q9UKW6 265 aaPredicted RBP17.15■□□□□ 0.34
CPSF3-201ENST00000238112 DTX4Q9Y2E6 619 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 EFCAB7A8K855 629 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 HRKO00198 91 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 HCRTR1O43613 425 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 TPOP07202 933 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SULT1A3P0DMM9 295 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SULT1A4P0DMN0 295 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SDHBP21912 280 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 YPEL5P62699 121 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 HSF2Q03933 536 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 NNATQ16517 81 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF761Q86XN6 746 aaPredicted RBP17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SFTPA2Q8IWL1 248 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF433Q8N7K0 673 aaPredicted RBP17.15■□□□□ 0.34
CPSF3-201ENST00000238112 ZNF527Q8NB42 609 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 HGDQ93099 445 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 RASD2Q96D21 266 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 BEX1Q9HBH7 125 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 NKIRAS2Q9NYR9 191 aa17.15■□□□□ 0.34
CPSF3-201ENST00000238112 MEIKINA0A087WXM9 373 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 OR6C68A6NDL8 312 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ACOD1A6NK06 481 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 IFITM5A6NNB3 132 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 AIPO00170 330 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 IMPA2O14732 288 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ARPC3O15145 178 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZNF749O43361 778 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 TNFP01375 233 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 RAF1P04049 648 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 TYRP1P17643 537 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ERVK-25P63136 954 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 UBE2IP63279 158 aaKnown RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 FAM69AQ5T7M9 428 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 NPSR1Q6W5P4 371 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ELMOD2Q8IZ81 293 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZPLD1Q8TCW7 415 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ORAI1Q96D31 301 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 CDCA3Q99618 268 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZNF275Q9NSD4 429 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 MRPL15Q9P015 296 aaKnown RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 HCN3Q9P1Z3 774 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 RCE1Q9Y256 329 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZNF281Q9Y2X9 895 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 OR10H1Q9Y4A9 318 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 RNF215Q9Y6U7 377 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 UNC80Q8N2C7 3258 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 A0A1B0GVT2 93 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 LINC01565O15544 149 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 PEX14O75381 377 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 CDC123O75794 336 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 SLC22A5O76082 557 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 OR7A10O76100 309 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ADRB1P08588 477 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 GRPRP30550 384 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 SRSF5Q13243 272 aaKnown RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZNF267Q14586 743 aaPredicted RBP17.14■□□□□ 0.33
CPSF3-201ENST00000238112 COL28A1Q2UY09 1125 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ARMC6Q6NXE6 501 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 CDH24Q86UP0 819 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 OR8H3Q8N146 312 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 SLC37A2Q8TED4 501 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 MS4A3Q96HJ5 214 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 MED30Q96HR3 178 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 C2orf42Q9NWW7 574 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 TRANK1O15050 2925 aa17.14■□□□□ 0.33
CPSF3-201ENST00000238112 FANCMQ8IYD8 2048 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 LEUTXA8MZ59 168 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 NPIPB9F8W1W9 429 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 PSMD9O00233 223 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 CRYZL1O95825 349 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 ECDO95905 644 aaPredicted RBP17.13■□□□□ 0.33
CPSF3-201ENST00000238112 DNASE1P24855 282 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 AP3S2P59780 193 aa17.13■□□□□ 0.33
CPSF3-201ENST00000238112 PRPS1P60891 318 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms