RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 PMEPA1Q969W9 287 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 SIPA1Q96FS4 1042 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
NUP88-201ENST00000225696 NCDNQ9UBB6 729 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 MRPS23Q9Y3D9 190 aaKnown RBP11.39□□□□□ -0.59
NUP88-201ENST00000225696 IER3IP1Q9Y5U9 82 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 KNL1Q8NG31 2342 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
NUP88-201ENST00000225696 A0A0B4J2E0 115 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 A0A1B0GX12 115 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 SIGLEC5O15389 551 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 FGF17O60258 216 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 GALR3O60755 368 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 PPM1BO75688 479 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ZFPL1O95159 310 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 CTRB1P17538 263 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 P2RX1P51575 399 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 GBX2P52951 348 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 SIGLEC14Q08ET2 396 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ZMYND11Q15326 602 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 C2orf27AQ580R0 203 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 CTRB2Q6GPI1 263 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 RGS7BPQ6MZT1 257 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 PAQR7Q86WK9 346 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 SLC35F2Q8IXU6 374 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 C12orf76Q8N812 135 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 COX18Q8N8Q8 333 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 THEM6Q8WUY1 208 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 LCORQ96JN0 433 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 NMNAT3Q96T66 252 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 PLEKHA1Q9HB21 404 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 OR5V1Q9UGF6 321 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 CHRNA9Q9UGM1 479 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 C19orf53Q9UNZ5 99 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 PTPRSQ13332 1948 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 A0A1B0GTH9 108 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 A0A1B0GVT2 93 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 A0A1W2PP55 124 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 OR2M5A3KFT3 312 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 PRR19A6NJB7 356 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ATP6V1G2-DDX39BF2Z307 99 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 GABARAPH6UMI1 98 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 KHDRBS3O75525 346 aaKnown RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 SERPINA3P01011 423 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 VSIG10L2P0DP72 767 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ICAM2P13598 275 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 TYRP1P17643 537 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 CDK2P24941 298 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 CMPK1P30085 196 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 GABRA3P34903 492 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 H2BFSP57053 126 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 PSMA6P60900 246 aaKnown RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 ACTC1P68032 377 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ACTA1P68133 377 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 FAM53BQ14153 422 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 METTL11BQ5VVY1 283 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 FAM71CQ8NEG0 241 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 OR4N2Q8NGD1 307 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 OR5M1Q8NGP8 315 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 SYNPRQ8TBG9 265 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 GAL3ST3Q96A11 431 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 ING1Q9UK53 422 aaPredicted RBP11.38□□□□□ -0.59
NUP88-201ENST00000225696 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
NUP88-201ENST00000225696 ANKRD20A5PA0PJZ0 165 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 SLC22A23A1A5C7 686 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 OR6C68A6NDL8 312 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 C1QTNF3-AMACRE9PGA6 284 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 PYCARD-AS1I3L0S3 204 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 L7N2F9 121 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 AIPO00170 330 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 SUSD5O60279 629 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 FMO6PO60774 539 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 SERPINI2O75830 405 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 KRT33AO76009 404 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 OR2T7P0C7T2 308 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ADRA2CP18825 462 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ACAA2P42765 397 aaKnown RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 TSFMP43897 325 aaKnown RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 HLXQ14774 488 aaPredicted RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 NDUFAF6Q330K2 333 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 FAM69AQ5T7M9 428 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 OR4D10Q8NGI6 311 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 OR2T27Q8NH04 317 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 SLC2A12Q8TD20 617 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ZNF707Q96C28 371 aaPredicted RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 PPA2Q9H2U2 334 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 KLHL9Q9P2J3 617 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 TBC1D29Q9UFV1 150 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms