RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 TMEM91Q6ZNR0 172 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 MED25Q71SY5 747 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 CHMP1BQ7LBR1 199 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 SLC29A4Q7RTT9 530 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 OR2T4Q8NH00 348 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 OR5AK2Q8NH90 309 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 TSSK2Q96PF2 358 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 ABRACLQ9P1F3 81 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF69Q9UC07 566 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 HS3ST3A1Q9Y663 406 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 SIRT4Q9Y6E7 314 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 A0A0B4J2E0 115 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 A0A1B0GX12 115 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 BHLHE40O14503 412 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 SPARCP09486 303 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 RORAP35398 523 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 LSSP48449 732 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 CCR6P51684 374 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 SERTAD2Q14140 314 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 NSDHLQ15738 373 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 FCRLAQ7L513 359 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 SIAH3Q8IW03 269 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 THAP3Q8WTV1 239 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 UBQLN4Q9NRR5 601 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 NCDNQ9UBB6 729 aa13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 MDC1Q14676 2089 aaKnown RBP13.75□□□□□ -0.21
UBE2D4-201ENST00000222402 FAM221BA6H8Z2 402 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 KRT33AO76009 404 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 NKX2-2O95096 273 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 THY1P04216 161 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 CD2P06729 351 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 UCHL1P09936 223 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 GABRG2P18507 467 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PLCXD2Q0VAA5 305 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 OR4C3Q8NH37 302 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 TNFAIP8L1Q8WVP5 186 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PRSS27Q9BQR3 290 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 MEPEQ9NQ76 525 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 TMEM74BQ9NUR3 256 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 FABP7O15540 132 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 CBX7O95931 251 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PNMTP11086 282 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 SDHBP21912 280 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PTBP1P26599 531 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 HLA-DMAP28067 261 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 DGCR2P98153 550 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 NKD1Q969G9 470 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PELOQ9BRX2 385 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 ERVMER34-1Q9H9K5 563 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 NPFFR2Q9Y5X5 522 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 E9PQ18 207 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 RBM34P42696 430 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 RPL6Q02878 288 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 TCTE1Q5JU00 501 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 WBP2NLQ6ICG8 309 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 PLCZ1Q86YW0 608 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 ADAMTS18Q8TE60 1221 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 ZDHHC12Q96GR4 267 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 NRSN2Q9GZP1 204 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 NUBP2Q9Y5Y2 271 aa13.74□□□□□ -0.21
UBE2D4-201ENST00000222402 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 EFCAB7A8K855 629 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 UBL3O95164 117 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 TCRBP04435 133 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 NPR2P20594 1047 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 SLC22A10Q63ZE4 541 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 SLC2A12Q8TD20 617 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 SENP5Q96HI0 755 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 NRIP3Q9NQ35 241 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CENPMQ9NSP4 180 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 FLRT3Q9NZU0 649 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 V9GY05 133 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 PLXNA2O75051 1894 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CDC40O60508 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 TRIM3O75382 744 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF823P16415 610 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 DLX2Q07687 328 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 OR5H6Q8NGV6 325 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 UPRTQ96BW1 309 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 RANBP3Q9H6Z4 567 aaPredicted RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 ADGRL4Q9HBW9 690 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 COPZ2Q9P299 210 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 KLF15Q9UIH9 416 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 MKI67P46013 3256 aaKnown RBP13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 HRKO00198 91 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 CYR61O00622 381 aa13.73□□□□□ -0.21
UBE2D4-201ENST00000222402 RPS27P42677 84 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms