RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 BCL2L2Q92843 193 aaPredicted RBP13.71□□□□□ -0.21
NME3-201ENST00000219302 TEX37Q96LM6 180 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 SLC38A2Q96QD8 506 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 SOX7Q9BT81 388 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 ROPN1BQ9BZX4 212 aaPredicted RBP13.71□□□□□ -0.21
NME3-201ENST00000219302 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 ROPN1Q9HAT0 212 aaPredicted RBP13.71□□□□□ -0.21
NME3-201ENST00000219302 MYOZ1Q9NP98 299 aaPredicted RBP13.71□□□□□ -0.21
NME3-201ENST00000219302 CA10Q9NS85 328 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 TMEM45AQ9NWC5 275 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
NME3-201ENST00000219302 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
NME3-201ENST00000219302 B9A039 149 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 PDE5AO76074 875 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 LGI1O95970 557 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 MYZAPP0CAP1 466 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 ZNF23P17027 643 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 PAX7P23759 505 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 ACAA2P42765 397 aaKnown RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 ABCE1P61221 599 aaKnown RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 SNRPD2P62316 118 aaKnown RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 LGALS3BPQ08380 585 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 OR7A5Q15622 319 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 EFNB3Q15768 340 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 DPY19L1Q2PZI1 675 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 FAM174BQ3ZCQ3 159 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 MRPL2Q5T653 305 aaKnown RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 KLHL24Q6TFL4 600 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 ABHD12BQ7Z5M8 362 aaPredicted RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 LRRC34Q8IZ02 419 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 C3orf49Q96BT1 292 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 SORT1Q99523 831 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 RLIMQ9NVW2 624 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.7□□□□□ -0.22
NME3-201ENST00000219302 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
NME3-201ENST00000219302 ARPC4-TTLL3A0A0A6YYG9 625 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 CCDC154A6NI56 674 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 E9PBE3 544 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 NR5A2O00482 541 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 TGFAP01135 160 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 IGLV1-44P01699 117 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 CRYAAP02489 173 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 SERPINE1P05121 402 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 DBIP07108 87 aaKnown RBP13.69□□□□□ -0.22
NME3-201ENST00000219302 OR4A8P0C604 315 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 IL7RP16871 459 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 LBPP18428 481 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 S100A3P33764 101 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 CDKN2CP42773 168 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 SELENOPP49908 381 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 RPL14P50914 215 aaKnown RBP13.69□□□□□ -0.22
NME3-201ENST00000219302 CLNS1AP54105 237 aaKnown RBP13.69□□□□□ -0.22
NME3-201ENST00000219302 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
NME3-201ENST00000219302 NAAAQ02083 359 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 BNIP2Q12982 314 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 ZSWIM7Q19AV6 140 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 COX20Q5RI15 118 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 TMEM225Q6GV28 225 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 SPATA19Q7Z5L4 167 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 EPHX4Q8IUS5 362 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 MAGEE2Q8TD90 523 aaPredicted RBP13.69□□□□□ -0.22
NME3-201ENST00000219302 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 PKNOX2Q96KN3 472 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 BPESC1Q9GZL8 116 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 HAO1Q9UJM8 370 aa13.69□□□□□ -0.22
NME3-201ENST00000219302 WDR91A4D1P6 747 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CDHR4A6H8M9 788 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 NPIPB7O75200 414 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 UPK3AO75631 287 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 VAMP5O95183 116 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 STAMBPO95630 424 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CECR9P0C854 216 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 GKN3PP0CG01 181 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CXCR1P25024 350 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 GIFP27352 417 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 IL12AP29459 219 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CALCRP30988 508 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 PPOXP50336 477 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 UFM1P61960 85 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 HGFACQ04756 655 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 GNA13Q14344 377 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 SQLEQ14534 574 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CHI3L2Q15782 390 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CARTPTQ16568 116 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 CR1LQ2VPA4 569 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 SLC46A3Q7Z3Q1 461 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 GPAT4Q86UL3 456 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 ZNF440Q8IYI8 595 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 ZNF540Q8NDQ6 660 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
NME3-201ENST00000219302 DOK1Q99704 481 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 SEC61A2Q9H9S3 476 aa13.68□□□□□ -0.22
NME3-201ENST00000219302 LRP5LA4QPB2 252 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms