RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GHSRQ92847 366 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 BMFQ96LC9 184 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 CPNE7Q9UBL6 633 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 C17orf113A0A1B0GUU1 675 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 FEZF1A0PJY2 475 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OMGP23515 440 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 TMEM225Q6GV28 225 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ADGRG3Q86Y34 549 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 NICN1Q9BSH3 213 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 TRAF4Q9BUZ4 470 aaPredicted RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 POFUT1Q9H488 388 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 TUBB1Q9H4B7 451 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 LTB4R2Q9NPC1 389 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ZNF281Q9Y2X9 895 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 IGKV6-21A0A0C4DH24 114 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 ZNF860A6NHJ4 632 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CCSO14618 274 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 APEHP13798 732 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 PGCP20142 388 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 LAP3P28838 519 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 KIR2DL3P43628 341 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 HOXC5Q00444 222 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 TLE1Q04724 770 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 C4orf17Q53FE4 359 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 HENMT1Q5T8I9 393 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 HSD17B11Q8NBQ5 300 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 EGLN2Q96KS0 407 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 ELF4Q99607 663 aaPredicted RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 BOCQ9BWV1 1114 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 RLIMQ9NVW2 624 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 SCML1Q9UN30 329 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 BTBD17A6NE02 478 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 MT-CO2P00403 227 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CSF2RAP15509 400 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 TAS2R30P59541 319 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 OR4C11Q6IEV9 310 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 USP51Q70EK9 711 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 DEFB119Q8N690 84 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CSNK1A1LQ8N752 337 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 HORMAD2Q8N7B1 307 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 ARHGAP9Q9BRR9 750 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 BRF2Q9HAW0 419 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 PLEKHJ1Q9NW61 149 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 SETD1AO15047 1707 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 M0QYG6 137 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 F10P00742 488 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 RAD52P43351 418 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 RIN1Q13671 783 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CTF1Q16619 201 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 NIPAL3Q6P499 406 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CMTM1Q8IZ96 169 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 MIB2Q96AX9 1013 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CHRDQ9H2X0 955 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 TMPRSS5Q9H3S3 457 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 EHFQ9NZC4 300 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 MGST1P10620 155 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 CALCRP30988 508 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 NTSR1P30989 418 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 HMGCLP35914 325 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 ILKQ13418 452 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 RUNX3Q13761 415 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 NNATQ16517 81 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 SLC35F3Q8IY50 421 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 NANOGP1Q8N7R0 232 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 OR4K15Q8NH41 348 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 SLC2A12Q8TD20 617 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 CA5BP1Q8WTZ4 195 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 NAA11Q9BSU3 229 aaPredicted RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 PRO1933Q9H354 126 aa9.74□□□□□ -0.85
VCL-201ENST00000211998 APOBEC3BQ9UH17 382 aaKnown RBP9.74□□□□□ -0.85
VCL-201ENST00000211998 ZNF217O75362 1048 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SERPINE2P07093 398 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CSF2RBP32927 897 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CARD17Q5XLA6 110 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 RBMS3Q6XE24 437 aaKnown RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 ZNF704Q6ZNC4 412 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 GPRIN1Q7Z2K8 1008 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 TIPARPQ7Z3E1 657 aaKnown RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 GPR150Q8NGU9 434 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 FIBINQ8TAL6 211 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 UCN3Q969E3 161 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 IL17FQ96PD4 163 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ATOH8Q96SQ7 321 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SLCO5A1Q9H2Y9 848 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 DUSP21Q9H596 190 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MYH3P11055 1940 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 IGKV6D-21A0A0A0MT36 114 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 PPP5D1E7EU14 171 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MSTNO14793 375 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MT-ND4LP03901 98 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms