RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 C11orf54Q9H0W9 315 aaPredicted RBP9.66□□□□□ -0.86
CD4-201ENST00000011653 DLL3Q9NYJ7 618 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 TCFL5Q9UL49 500 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 HS3ST3B1Q9Y662 390 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 SVILO95425 2214 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 ALPK2Q86TB3 2170 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 TMEM129A0AVI4 362 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 BLACEA4D250 179 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 CPSF4LA6NMK7 179 aaKnown RBP9.66□□□□□ -0.86
CD4-201ENST00000011653 PRODHO43272 600 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 SCO2O43819 266 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 TSPAN9O75954 239 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 MYL9P24844 172 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 PLCXD2Q0VAA5 305 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 RAB40BQ12829 278 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 GNA13Q14344 377 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 QPRTQ15274 297 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 CRTC2Q53ET0 693 aaPredicted RBP9.66□□□□□ -0.86
CD4-201ENST00000011653 RDH10Q8IZV5 341 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 SIRT6Q8N6T7 355 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 BCORP1Q8N888 145 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 NLGN4YQ8NFZ3 816 aaPredicted RBP9.66□□□□□ -0.86
CD4-201ENST00000011653 OR2Y1Q8NGV0 311 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 TEX47Q8TBZ9 253 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 RNFT2Q96EX2 444 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 PRRC1Q96M27 445 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 FRMD6Q96NE9 622 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 TTYH2Q9BSA4 534 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 DEFB126Q9BYW3 111 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 PFDN2Q9UHV9 154 aa9.66□□□□□ -0.86
CD4-201ENST00000011653 IGLV3-12A0A075B6K2 115 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 ANKRD34BA5PLL1 514 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 VSTM2BA6NLU5 285 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 YES1P07947 543 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 IL12BP29460 328 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 RGS8P57771 180 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 RPS25P62851 125 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 CDK5Q00535 292 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 MRPL28Q13084 256 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 EBPQ15125 230 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 SLC35F1Q5T1Q4 408 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 LCN1P1Q5VSP4 162 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 C1orf94Q6P1W5 598 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 POMZP3Q6PJE2 187 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 KIRREL2Q6UWL6 708 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 BTN2A1Q7KYR7 527 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 SPERTQ8NA61 448 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 LSM14AQ8ND56 463 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 OR6T1Q8NGN1 323 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 TMEM163Q8TC26 289 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 TMEM246Q9BRR3 403 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 FGF20Q9NP95 211 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 C19orf25Q9UFG5 118 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 KCNE5Q9UJ90 142 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 LIPT1Q9Y234 373 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 YARS2Q9Y2Z4 477 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 EXOSC1Q9Y3B2 195 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 NSG1A0A0A6YYJ2 146 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 B4DXG7 233 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 STMND1H3BQB6 276 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 SEC14L5O43304 696 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 ZNF354AO60765 605 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 APOL3O95236 402 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 PPP3R1P63098 170 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 RNF4P78317 190 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 EIF3IQ13347 325 aaKnown RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 TPBGQ13641 420 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 DECR1Q16698 335 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 ENTPD8Q5MY95 495 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 OR2G6Q5TZ20 316 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 GLRX5Q86SX6 157 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 LCORQ96JN0 433 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 SLC46A1Q96NT5 459 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 SLC38A2Q96QD8 506 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 WDR77Q9BQA1 342 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 KATNB1Q9BVA0 655 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 WWTR1Q9GZV5 400 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 RNF121Q9H920 327 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 DUSP22Q9NRW4 184 aa9.65□□□□□ -0.86
CD4-201ENST00000011653 PAQR5Q9NXK6 330 aaPredicted RBP9.65□□□□□ -0.86
CD4-201ENST00000011653 A0A0G2JPF8 293 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 HNRNPCL2B2RXH8 293 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 HNRNPCL3B7ZW38 293 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 G3V3Y1 287 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 NKX2-2O95096 273 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 NUDT14O95848 222 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 CLPSP04118 112 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 IGKV3-11P04433 115 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 HNRNPCL4P0DMR1 293 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 PRG2P13727 222 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 GABRA5P31644 462 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 IFNGR2P38484 337 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 ARHGAP11BQ3KRB8 267 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 MRPL2Q5T653 305 aaKnown RBP9.65□□□□□ -0.87
CD4-201ENST00000011653 TRIQKQ629K1 86 aa9.65□□□□□ -0.87
CD4-201ENST00000011653 SLC27A4Q6P1M0 643 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms