RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Slc39a12Q5FWH7 689 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Dvl3Q61062 716 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Spin1Q61142 262 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr298Q7TS06 332 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 2610318N02RikQ80VT5 305 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Znf574Q8BY46 900 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Wdr37Q8CBE3 496 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 CthQ8VCN5 398 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Fam110cQ8VE94 421 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Klhl22Q99JN2 634 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Tktl1Q99MX0 595 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Kiaa0141Q9DCV6 510 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Prss16Q9QXE5 509 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 IghdA0A0A6YW14 291 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 TrdcA0A0G2JEU3 153 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Pdzd8B9EJ80 1147 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Btbd16E9Q173 522 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Gm21876F6XK35 94 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 C1dO35473 141 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Tnfrsf1bP25119 474 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Spata13Q5DU57 656 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Prps1l1Q8C5R8 318 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Tmed11Q9D2R4 215 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Actl11Q9D5V1 1207 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Ift22Q9DAI2 185 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Acss2Q9QXG4 701 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Slc22a21Q9WTN6 564 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 TfecQ9WTW4 317 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Cacna1bO55017 2327 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Igkv12-44A0A140T8M2 115 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Zfp534A2A7A1 661 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Zfp40B1B1D3 796 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 FxnO35943 207 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Slc6a18O88576 615 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Tcn2O88968 430 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 C9P06683 548 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Cdk1P11440 297 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Hoxd9P28357 339 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Rps25P62852 125 aaKnown RBP14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Malt1Q2TBA3 832 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr645Q7TRQ1 315 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Krr1Q8BGA5 380 aaKnown RBP14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 OacylQ8BML2 685 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Chpt1Q8C025 398 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Ctxn1Q8K129 82 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Dlgap5Q8K4R9 808 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Rhbdl1Q8VC82 373 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Med9Q8VCS6 142 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 PigkQ9CXY9 395 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Qtrt1Q9JMA2 403 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Il17bQ9QXT6 180 aa14.6□□□□□ -0.07
Trim39-203ENSMUST00000113706 Lama1P19137 3084 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr1432A0A140LHS7 346 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Amd2D3Z6H8 334 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Klrg1O88713 188 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 P06336 421 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Fzd7Q61090 572 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Slc26a11Q80ZD3 593 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfml2aQ8BHP7 681 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Acp6Q8BP40 418 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Csnka2ipQ8CH19 720 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 TifabQ8JZM6 147 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr1417Q8VGJ6 315 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Edem1Q925U4 652 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Pdzk1Q9JIL4 519 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Htra1Q9R118 480 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Ppp1r17Q9Z2E4 159 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 CcniQ9Z2V9 377 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Cd83O88324 196 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 StarP51557 284 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Ccr4P51680 360 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Serpina3fQ80X76 445 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr633Q8VF02 312 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr1387Q8VFA9 311 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Prl3c1Q9QUN5 212 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Bloc1s6Q9R0C0 172 aa14.59□□□□□ -0.07
Trim39-203ENSMUST00000113706 Olfr1089A0A1L1SRK6 311 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Zfp362B1ASA5 418 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Vmn2r34E9PVI0 852 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Vmn2r37F8VQD3 802 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Vmn1r12G5E8G1 307 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 CyctP00015 105 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Fxyd2Q04646 70 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Gm10644Q3TZG3 87 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Gpr176Q80WT4 515 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Slitrk2Q810C0 846 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 MaobQ8BW75 520 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Rad51ap1Q8C551 337 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 Paip1Q8VE62 400 aa14.58□□□□□ -0.07
Trim39-203ENSMUST00000113706 FrylF8VQ05 3007 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Gm16432A0A0A6YXX9 775 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 A0A286YD13 301 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr730E9Q8M3 318 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr190K7N5T5 307 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Rnf13O54965 381 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Rplp0P14869 317 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Olfr6P34986 316 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 HbegfQ06186 208 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Khdc4Q3TCX3 612 aa14.58□□□□□ -0.08
Trim39-203ENSMUST00000113706 Cdv3Q4VAA2 281 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms