RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Vmn1r16K7N775 303 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gstm3P19639 218 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Fam160a2Q3U2I3 975 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Wfdc6aQ3UW55 136 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Xkr7Q5GH64 580 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 LcorQ6ZPI3 433 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Supv3l1Q80YD1 779 aaKnown RBP20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Dusp28Q8BTR5 163 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Hbq1aQ8BYM1 145 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Pom121Q8K3Z9 1200 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr460Q8VF31 314 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr622Q8VGY7 317 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Dusp7Q91Z46 422 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Mrgpra5Q91ZC7 304 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Btnl10Q9JK39 275 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gm11214V9GX06 183 aa20.76■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cd300ld4A2A7W1 245 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 2610021A01RikE9Q0Q3 834 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Zfp870J3QMA4 560 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Irs3O54718 495 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 P06336 421 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tnfrsf1bP25119 474 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Hoxc5P32043 222 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Rad52P43352 420 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Copz1P61924 177 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nrsn1P97799 196 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Slc35f3Q1LZI2 421 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 UradQ283N4 178 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Jmjd8Q3TA59 316 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tmem247Q497K7 211 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ppp3r2Q63811 179 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cd300ld3Q6SJQ5 245 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nipal3Q8BGN5 410 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Plekhm3Q8BM47 761 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Mterf4Q8BVN4 346 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Acaa2Q8BWT1 397 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cox10Q8CFY5 443 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Amdhd2Q8JZV7 409 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ctxn1Q8K129 82 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ahsa2Q8N9S3 331 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr350Q8VFP8 312 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Fgfrl1Q91V87 529 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Mrgprb4Q91ZC0 321 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Taar1Q923Y8 332 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Klhl22Q99JN2 634 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Exo5Q9CXP9 373 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Neurl2Q9D0S4 285 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Phyhd1Q9DB26 291 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Rtp4Q9ER80 249 aaKnown RBP20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 TapbpQ9R233 465 aa20.75■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Trav8n-2A0A075B633 112 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gm13124A2A752 406 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Chrna10B2RX82 447 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Acvr2aP27038 513 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 PtnP63089 168 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Art1Q60935 325 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Fkbp10Q61576 581 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr297Q7TS07 310 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nectin4Q8R007 508 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Mterf3Q8R3J4 412 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Kiaa0141Q9DCV6 510 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cpn1Q9JJN5 457 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Slc30a7Q9JKN1 378 aa20.74■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ccdc7bE9Q9Y3 381 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Hoxa10P31310 416 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr13P34984 310 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 CpoxP36552 443 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Acod1P54987 488 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tas2r135Q7TQA9 312 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Krr1Q8BGA5 380 aaKnown RBP20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 RfkQ8CFV9 155 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Pphln1Q8K2H1 381 aaKnown RBP20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 GabrpQ8QZW7 440 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ttc4Q8R3H9 386 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 B3gat1Q9CW73 334 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Trim13Q9CYB0 407 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tomm34Q9CYG7 309 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Srfbp1Q9CZ91 441 aaKnown RBP20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Brix1Q9DCA5 353 aaKnown RBP20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 GabarapQ9DCD6 117 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cnot9Q9JKY0 299 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 ClnkQ9QZE2 435 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Xpr1Q9Z0U0 695 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Zfp292Q9Z2U2 2698 aa20.73■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gm16432A0A0A6YXX9 775 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 PtprhE9Q0N2 971 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Vmn1r184E9Q2N4 314 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ubl4aP21126 157 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Foxk1P42128 719 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 TstP52196 297 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 CrxosQ3UL53 246 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Dnaaf3Q3UYV8 586 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Commd6Q3V4B5 87 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Zscan26Q5RJ54 466 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tlx2Q61663 284 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Abhd13Q80UX8 337 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Prap1Q80XD8 149 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gpr68Q8BFQ3 365 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Baiap2Q8BKX1 535 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Lhfpl6Q8BM86 200 aa20.72■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms