RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 NgpO08692 167 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 H2-T23P06339 357 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 NrtnP97463 195 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Cmklr1P97468 371 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Atp5a1Q03265 553 aaKnown RBP15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Tmem248Q3TBN1 314 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Pak6Q3ULB5 682 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Taar7bQ5QD11 358 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Znf354aQ61751 572 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 P2ry10bQ8BY68 352 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Agbl3Q8CDP0 1006 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Alkbh3Q8K1E6 286 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 GhitmQ91VC9 346 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Laptm4bQ91XQ6 227 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Mrm1Q99J25 320 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Abcg5Q99PE8 652 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Steap1Q9CWR7 339 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Dimt1Q9D0D4 313 aaKnown RBP15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Kcne3Q9WTW2 103 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Slc25a34A2ADF7 318 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Gm10439A2AJU2 433 aaKnown RBP15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Olfr1076A2AK60 313 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Gm15114B1B0X6 433 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 4930595D18RikD3Z642 64 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 P01809 118 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Egfbp2P36368 261 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Fxyd2Q04646 70 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 SctQ08535 133 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Riiad1Q3KNY5 119 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Gm648Q3UJ22 213 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Q3USZ8 430 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 EndouQ3V188 412 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Olfr309Q7TS01 308 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Mettl7a1Q8C6B0 244 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Agpat4Q8K4X7 378 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Glb1lQ8VC60 646 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Vmn1r53Q9EP93 310 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Lgi1Q9JIA1 557 aa15.03■□□□□ -0
Trim28-201ENSMUST00000005705 Gm13539A0A1B0GSM6 183 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Olfr294F7CWV4 335 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 OtcP11725 354 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Gabrb1P50571 474 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Snx33Q4VAA7 574 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 CishQ62225 257 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Surf4Q64310 269 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Tmed3Q78IS1 221 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Defb36Q8K3U4 67 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Olfr868Q8VFI8 309 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Rab14Q91V41 215 aaKnown RBP15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Hrh4Q91ZY2 391 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Bcl7bQ921K9 202 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Hint3Q9CPS6 165 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 4930503E14RikQ9D583 177 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Shisa5Q9D7I0 235 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Hoga1Q9DCU9 321 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Olfr44Q9EQB8 314 aa15.02■□□□□ -0
Trim28-201ENSMUST00000005705 Slc23a4A0A0J9YUX7 615 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gm14418A2ARR6 358 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Olfr1164A2AVT5 326 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gm14322A2AW66 358 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gm8765B7ZWJ3 1017 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 SvaE9PX96 165 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Zbtb25G3UW50 439 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Zfp616J3QN14 987 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Pip5k1cO70161 661 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Fpr1P33766 364 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Nup43P59235 380 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Tbx4P70325 552 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gm906Q3V0M1 1017 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Lin28bQ45KJ6 247 aaKnown RBP15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 CalcrQ60755 533 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Ffar4Q7TMA4 361 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 DgkzQ80UP3 929 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Mrps7Q80X85 242 aaKnown RBP15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Pi15Q8BS03 258 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gpr18Q8K1Z6 331 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Vmn1r74Q8R290 304 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 LgalslQ8VED9 172 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Olfr164Q8VF87 315 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Raf1Q99N57 648 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Mgat4cQ9D306 478 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 RhouQ9EQT3 261 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Nox4Q9JHI8 578 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 SpegQ62407 3262 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Col9a3A2ACT7 680 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Olfr1338A2ACY7 313 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Olfr1206A2ATJ9 307 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 AhrrQ3U1U7 701 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Prss50Q8BLH5 439 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Cables2Q8K3M5 476 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Pfn4Q9D6I3 129 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Tnfrsf22Q9ER62 198 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Fbxw5Q9QXW2 573 aa15.02□□□□□ -0.01
Trim28-201ENSMUST00000005705 Gm5475D3YV11 175 aa15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 Ces2gE9PV38 560 aa15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 Vmn2r105E9Q3A5 860 aa15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 Zfp994J3QM38 661 aa15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 PrkacaP05132 351 aaKnown RBP15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 Tspan5P62080 268 aa15.01□□□□□ -0.01
Trim28-201ENSMUST00000005705 Ppp2cbP62715 309 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms