RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 PFA3P42836 336 aa3.88□□□□□ -1.79
snR54snR54 SSY5P47002 699 aa3.88□□□□□ -1.79
snR54snR54 MUP1P50276 574 aa3.88□□□□□ -1.79
snR54snR54 PKH1Q03407 766 aa3.88□□□□□ -1.79
snR54snR54 MUS81Q04149 632 aaPredicted RBP3.88□□□□□ -1.79
snR54snR54 DLT1Q04216 342 aa3.88□□□□□ -1.79
snR54snR54 TMN2Q04562 672 aa3.88□□□□□ -1.79
snR54snR54 MCH5Q08777 521 aa3.88□□□□□ -1.79
snR54snR54 CAF20P12962 161 aaKnown RBP3.87□□□□□ -1.79
snR54snR54 PER1P25625 357 aa3.87□□□□□ -1.79
snR54snR54 PZF1P39933 429 aa3.87□□□□□ -1.79
snR54snR54 TY4A-JP47023 414 aa3.87□□□□□ -1.79
snR54snR54 DAM1P53267 343 aa3.87□□□□□ -1.79
snR54snR54 ASM4Q05166 528 aa3.87□□□□□ -1.79
snR54snR54 MET7Q08645 548 aa3.87□□□□□ -1.79
snR54snR54 GAL11P19659 1081 aa3.86□□□□□ -1.79
snR54snR54 SCT1P32784 759 aa3.86□□□□□ -1.79
snR54snR54 SPC29P33419 253 aa3.86□□□□□ -1.79
snR54snR54 YBR053CP38235 358 aa3.86□□□□□ -1.79
snR54snR54 GGA2P38817 585 aaKnown RBP3.86□□□□□ -1.79
snR54snR54 SET5P38890 526 aaKnown RBP3.86□□□□□ -1.79
snR54snR54 YDR514CQ04408 483 aa3.86□□□□□ -1.79
snR54snR54 NSE3Q05541 303 aa3.86□□□□□ -1.79
snR54snR54 RSC3Q06639 885 aa3.86□□□□□ -1.79
snR54snR54 THI21Q08975 551 aa3.86□□□□□ -1.79
snR54snR54 ACF2Q12168 779 aa3.86□□□□□ -1.79
snR54snR54 GPR1Q12361 961 aa3.86□□□□□ -1.79
snR54snR54 YBR182C-AQ8TGU6 64 aa3.86□□□□□ -1.79
snR54snR54 ERR1P0CX10 437 aa3.85□□□□□ -1.79
snR54snR54 ERR2P0CX11 437 aa3.85□□□□□ -1.79
snR54snR54 SHR5P41912 237 aa3.85□□□□□ -1.79
snR54snR54 HXT16P47185 567 aa3.85□□□□□ -1.79
snR54snR54 NRG1Q03125 231 aa3.85□□□□□ -1.79
snR54snR54 ADY4Q05955 493 aa3.85□□□□□ -1.79
snR54snR54 REH1Q06709 432 aa3.85□□□□□ -1.79
snR54snR54 YLR415CO13578 112 aa3.84□□□□□ -1.79
snR54snR54 GND2P53319 492 aa3.84□□□□□ -1.79
snR54snR54 ATP25Q03153 612 aa3.84□□□□□ -1.79
snR54snR54 TGL5Q12043 749 aa3.84□□□□□ -1.79
snR54snR54 STI1P15705 589 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
snR54snR54 MTH1P35198 433 aa3.83□□□□□ -1.8
snR54snR54 RLP7P40693 322 aaKnown RBP3.83□□□□□ -1.8
snR54snR54 YJL163CP46996 555 aa3.83□□□□□ -1.8
snR54snR54 NNF1P47149 201 aa3.83□□□□□ -1.8
snR54snR54 TIM44Q01852 431 aa3.83□□□□□ -1.8
snR54snR54 YDR338CQ05497 695 aa3.83□□□□□ -1.8
snR54snR54 CRR1Q05790 422 aa3.83□□□□□ -1.8
snR54snR54 IRC13Q08630 104 aa3.83□□□□□ -1.8
snR54snR54 DIF1O13577 133 aa3.82□□□□□ -1.8
snR54snR54 NGG1P32494 702 aa3.82□□□□□ -1.8
snR54snR54 TIM23P32897 222 aa3.82□□□□□ -1.8
snR54snR54 SIC1P38634 284 aa3.82□□□□□ -1.8
snR54snR54 ALY2P47029 1046 aa3.82□□□□□ -1.8
snR54snR54 MTR3P48240 250 aaPredicted RBP3.82□□□□□ -1.8
snR54snR54 MAL11P53048 616 aa3.82□□□□□ -1.8
snR54snR54 ZIP2P53061 704 aa3.82□□□□□ -1.8
snR54snR54 YOL098CQ12496 1037 aa3.82□□□□□ -1.8
snR54snR54 SPC42P36094 363 aa3.81□□□□□ -1.8
snR54snR54 YHL017WP38745 532 aa3.81□□□□□ -1.8
snR54snR54 GDH3P39708 457 aa3.81□□□□□ -1.8
snR54snR54 SDS3P40505 327 aa3.81□□□□□ -1.8
snR54snR54 QRI1P43123 477 aaKnown RBP3.81□□□□□ -1.8
snR54snR54 HBT1Q07653 1046 aaKnown RBP3.81□□□□□ -1.8
snR54snR54 IRC10Q08118 586 aa3.81□□□□□ -1.8
snR54snR54 SRP40P32583 406 aaPredicted RBP3.8□□□□□ -1.8
snR54snR54 PBP2P38151 413 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
snR54snR54 PCL5P38794 229 aa3.8□□□□□ -1.8
snR54snR54 YIR042CP40586 236 aa3.8□□□□□ -1.8
snR54snR54 STU2P46675 888 aa3.8□□□□□ -1.8
snR54snR54 DAS1P47005 663 aa3.8□□□□□ -1.8
snR54snR54 HSV2P50079 448 aaPredicted RBP3.8□□□□□ -1.8
snR54snR54 AMA1P50082 593 aa3.8□□□□□ -1.8
snR54snR54 ZDS1P50111 915 aaKnown RBP3.8□□□□□ -1.8
snR54snR54 YOR131CQ12486 218 aa3.8□□□□□ -1.8
snR54snR54 LAT1P12695 482 aaKnown RBP3.79□□□□□ -1.8
snR54snR54 YKL091CP33324 310 aaKnown RBP3.79□□□□□ -1.8
snR54snR54 BCD1P38772 366 aa3.79□□□□□ -1.8
snR54snR54 HOS4P40480 1083 aa3.79□□□□□ -1.8
snR54snR54 MRH1Q12117 320 aaPredicted RBP3.79□□□□□ -1.8
snR54snR54 HIS7P33734 552 aaKnown RBP3.78□□□□□ -1.8
snR54snR54 MTC2P34246 357 aa3.78□□□□□ -1.8
snR54snR54 YPT53P36019 220 aa3.78□□□□□ -1.8
snR54snR54 MCD4P36051 919 aa3.78□□□□□ -1.8
snR54snR54 Q0142Q9ZZW4 58 aa3.78□□□□□ -1.8
snR54snR54 OCA5P38738 679 aa3.77□□□□□ -1.81
snR54snR54 CHZ1P40019 153 aaPredicted RBP3.77□□□□□ -1.81
snR54snR54 TEX1P53851 422 aaKnown RBP3.77□□□□□ -1.81
snR54snR54 RPN4Q03465 531 aa3.77□□□□□ -1.81
snR54snR54 YLR149CQ99296 730 aa3.77□□□□□ -1.81
snR54snR54 CDC9P04819 755 aa3.76□□□□□ -1.81
snR54snR54 MEF1P25039 761 aa3.76□□□□□ -1.81
snR54snR54 YBR259WP38338 688 aa3.76□□□□□ -1.81
snR54snR54 BUD6P41697 788 aa3.76□□□□□ -1.81
snR54snR54 PRP31P49704 494 aaPredicted RBP3.76□□□□□ -1.81
snR54snR54 YML122CQ03207 126 aa3.76□□□□□ -1.81
snR54snR54 GAD1Q04792 585 aa3.76□□□□□ -1.81
snR54snR54 SUT2Q12286 268 aa3.76□□□□□ -1.81
snR54snR54 ADE2P21264 571 aaKnown RBP3.75□□□□□ -1.81
snR54snR54 HIR1P32479 840 aa3.75□□□□□ -1.81
snR54snR54 DSS1P39112 969 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms