RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SSH3Q8TE77 659 aa21.74■■□□□ 1.07
PHGDH-230ENST00000641927 MTFR1LQ9H019 292 aa21.74■■□□□ 1.07
PHGDH-230ENST00000641927 MYH3P11055 1940 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 CSF1RP07333 972 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 POLA2Q14181 598 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 CCDC152Q4G0S7 254 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 C3orf67Q6ZVT6 689 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 GREM2Q9H772 168 aa21.73■■□□□ 1.07
PHGDH-230ENST00000641927 IFIT5Q13325 482 aaKnown RBP21.72■■□□□ 1.07
PHGDH-230ENST00000641927 ITGA6P23229 1130 aa21.71■■□□□ 1.07
PHGDH-230ENST00000641927 POLD1P28340 1107 aa21.71■■□□□ 1.07
PHGDH-230ENST00000641927 TAF7LQ5H9L4 462 aa21.71■■□□□ 1.07
PHGDH-230ENST00000641927 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-230ENST00000641927 KLHDC4Q8TBB5 520 aa21.71■■□□□ 1.07
PHGDH-230ENST00000641927 ANKRD18BA2A2Z9 1011 aa21.7■■□□□ 1.06
PHGDH-230ENST00000641927 SURF6O75683 361 aaKnown RBP21.7■■□□□ 1.06
PHGDH-230ENST00000641927 PA2G4Q9UQ80 394 aaKnown RBP21.7■■□□□ 1.06
PHGDH-230ENST00000641927 NRXN2Q9P2S2 1712 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 APBB1O00213 710 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 SF3B3Q15393 1217 aaKnown RBP21.69■■□□□ 1.06
PHGDH-230ENST00000641927 SIL1Q9H173 461 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 TNRC6CQ9HCJ0 1690 aaKnown RBP21.69■■□□□ 1.06
PHGDH-230ENST00000641927 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 RFX5P48382 616 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-230ENST00000641927 OS9Q13438 667 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-230ENST00000641927 ZNF594Q96JF6 807 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-230ENST00000641927 BRIP1Q9BX63 1249 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 DCTPP1Q9H773 170 aa21.69■■□□□ 1.06
PHGDH-230ENST00000641927 RPGRQ92834 1020 aaKnown RBP21.68■■□□□ 1.06
PHGDH-230ENST00000641927 GCC1Q96CN9 775 aa21.68■■□□□ 1.06
PHGDH-230ENST00000641927 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
PHGDH-230ENST00000641927 RIC1Q4ADV7 1423 aa21.68■■□□□ 1.06
PHGDH-230ENST00000641927 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
PHGDH-230ENST00000641927 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
PHGDH-230ENST00000641927 SOCS7O14512 581 aa21.66■■□□□ 1.06
PHGDH-230ENST00000641927 PDE6BP35913 854 aa21.66■■□□□ 1.06
PHGDH-230ENST00000641927 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
PHGDH-230ENST00000641927 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.061e-6■■■□□ 18.8
PHGDH-230ENST00000641927 DDX46Q7L014 1031 aaKnown RBP21.66■■□□□ 1.06
PHGDH-230ENST00000641927 SMC5Q8IY18 1101 aa21.66■■□□□ 1.06
PHGDH-230ENST00000641927 HSP90AB4PQ58FF6 505 aa21.65■■□□□ 1.06
PHGDH-230ENST00000641927 CDC5LQ99459 802 aaKnown RBP21.65■■□□□ 1.06
PHGDH-230ENST00000641927 RTL9Q8NET4 1388 aa21.65■■□□□ 1.06
PHGDH-230ENST00000641927 ZBTB47Q9UFB7 747 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-230ENST00000641927 ANKRD31Q8N7Z5 1873 aa21.64■■□□□ 1.05
PHGDH-230ENST00000641927 IGHMBP2P38935 993 aaKnown RBP21.63■■□□□ 1.05
PHGDH-230ENST00000641927 CRY2Q49AN0 593 aa21.63■■□□□ 1.05
PHGDH-230ENST00000641927 ANKRD45Q5TZF3 282 aa21.63■■□□□ 1.05
PHGDH-230ENST00000641927 LDHAL6AQ6ZMR3 332 aa21.63■■□□□ 1.05
PHGDH-230ENST00000641927 NOP58Q9Y2X3 529 aaKnown RBP21.63■■□□□ 1.05
PHGDH-230ENST00000641927 MPHOSPH8Q99549 860 aa21.63■■□□□ 1.05
PHGDH-230ENST00000641927 CNNM1Q9NRU3 951 aa21.63■■□□□ 1.05
PHGDH-230ENST00000641927 RAB11FIP3O75154 756 aa21.62■■□□□ 1.05
PHGDH-230ENST00000641927 C2CD5Q86YS7 1000 aa21.62■■□□□ 1.05
PHGDH-230ENST00000641927 ANKRD18AQ8IVF6 992 aa21.62■■□□□ 1.05
PHGDH-230ENST00000641927 RBM17Q96I25 401 aaKnown RBP21.62■■□□□ 1.05
PHGDH-230ENST00000641927 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
PHGDH-230ENST00000641927 KLRG2A4D1S0 409 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-230ENST00000641927 EYA2O00167 538 aa21.61■■□□□ 1.05
PHGDH-230ENST00000641927 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
PHGDH-230ENST00000641927 CELF1Q92879 486 aaKnown RBP21.61■■□□□ 1.05
PHGDH-230ENST00000641927 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
PHGDH-230ENST00000641927 PPP1R1BQ9UD71 204 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-230ENST00000641927 C10orf71Q711Q0 1435 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 H0YIN7 160 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 ERC1Q8IUD2 1116 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 KLHL34Q8N239 644 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 SRGNP10124 158 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 PTGER2P43116 358 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 SGIP1Q9BQI5 828 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 PDZRN3Q9UPQ7 1066 aa21.6■■□□□ 1.05
PHGDH-230ENST00000641927 TAF1P21675 1872 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-230ENST00000641927 CIAO1O76071 339 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 NPR1P16066 1061 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 IL15P40933 162 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-230ENST00000641927 RPS8P62241 208 aaKnown RBP21.59■■□□□ 1.05
PHGDH-230ENST00000641927 NUCB1Q02818 461 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 GRAPQ13588 217 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-230ENST00000641927 RHPN1Q8TCX5 695 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 ZNF622Q969S3 477 aaKnown RBP eCLIP21.59■■□□□ 1.053e-9■■■□□ 17.8
PHGDH-230ENST00000641927 KIF1BPQ96EK5 621 aa21.59■■□□□ 1.05
PHGDH-230ENST00000641927 SPEF2Q9C093 1822 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 CHRNA5P30532 468 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 LNPKQ9C0E8 428 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 IL1RAPL2Q9NP60 686 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
PHGDH-230ENST00000641927 SASH1O94885 1247 aa21.57■■□□□ 1.04
PHGDH-230ENST00000641927 HOXA10P31260 410 aaPredicted RBP21.57■■□□□ 1.04
PHGDH-230ENST00000641927 CHD1LQ86WJ1 897 aa21.57■■□□□ 1.04
PHGDH-230ENST00000641927 MASTLQ96GX5 879 aa21.57■■□□□ 1.04
PHGDH-230ENST00000641927 COL4A1P02462 1669 aa21.57■■□□□ 1.04
PHGDH-230ENST00000641927 TFCP2Q12800 502 aa21.56■■□□□ 1.04
PHGDH-230ENST00000641927 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
PHGDH-230ENST00000641927 CRAMP1Q96RY5 1269 aa21.56■■□□□ 1.04
PHGDH-230ENST00000641927 COL11A2P13942 1736 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms