RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 VPS53Q5VIR6 699 aa20.37■□□□□ 0.85
PHGDH-229ENST00000641891 NSFL1CQ9UNZ2 370 aaKnown RBP20.37■□□□□ 0.85
PHGDH-229ENST00000641891 ITGB4P16144 1822 aa20.37■□□□□ 0.85
PHGDH-229ENST00000641891 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
PHGDH-229ENST00000641891 HAUS7Q99871 368 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 ZNF609O15014 1411 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 TIMM10P62072 90 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 CCDC83Q8IWF9 413 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 NEUROD6Q96NK8 337 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 JCADQ9P266 1359 aa20.36■□□□□ 0.85
PHGDH-229ENST00000641891 ZSCAN23Q3MJ62 389 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
PHGDH-229ENST00000641891 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.35■□□□□ 0.85
PHGDH-229ENST00000641891 DISP2A7MBM2 1401 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 TAF5LO75529 589 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 ST3GAL1Q11201 340 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 TCIRG1Q13488 830 aa20.35■□□□□ 0.85
PHGDH-229ENST00000641891 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
PHGDH-229ENST00000641891 TCEANC2Q96MN5 208 aa20.34■□□□□ 0.85
PHGDH-229ENST00000641891 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
PHGDH-229ENST00000641891 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
PHGDH-229ENST00000641891 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
PHGDH-229ENST00000641891 EYA2O00167 538 aa20.33■□□□□ 0.85
PHGDH-229ENST00000641891 IL15P40933 162 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-229ENST00000641891 SLFNL1Q499Z3 407 aa20.33■□□□□ 0.85
PHGDH-229ENST00000641891 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-229ENST00000641891 SMC3Q9UQE7 1217 aa20.33■□□□□ 0.85
PHGDH-229ENST00000641891 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-229ENST00000641891 ROBO1Q9Y6N7 1651 aa20.33■□□□□ 0.85
PHGDH-229ENST00000641891 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-229ENST00000641891 ME3Q16798 604 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 NECAB1Q8N987 351 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 TPCN1Q9ULQ1 816 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
PHGDH-229ENST00000641891 SYT1P21579 422 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 ZNF445P59923 1031 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 RFX7Q2KHR2 1363 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 GOLIM4O00461 696 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
PHGDH-229ENST00000641891 STARD3NLO95772 234 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 PSMA5P28066 241 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 GJB2P29033 226 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 HLFQ16534 295 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 BLOC1S2Q6QNY1 142 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 KBTBD3Q8NAB2 608 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-229ENST00000641891 GPR108Q9NPR9 543 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 BCL9O00512 1426 aa20.3■□□□□ 0.84
PHGDH-229ENST00000641891 STX6O43752 255 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-229ENST00000641891 SYTL4Q96C24 671 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-229ENST00000641891 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-229ENST00000641891 SH2B1Q9NRF2 756 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-229ENST00000641891 PAG1Q9NWQ8 432 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 CIAO1O76071 339 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 RPS6KB1P23443 525 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 GPTP24298 496 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 USPL1Q5W0Q7 1092 aa20.29■□□□□ 0.84
PHGDH-229ENST00000641891 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 GADD45BO75293 160 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-229ENST00000641891 MCMDC2Q4G0Z9 681 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 FAM43AQ8N2R8 423 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 PCCAP05165 728 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-229ENST00000641891 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
PHGDH-229ENST00000641891 CCDC57Q2TAC2 916 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
PHGDH-229ENST00000641891 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-229ENST00000641891 TOB2Q14106 344 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-229ENST00000641891 USP48Q86UV5 1035 aa20.27■□□□□ 0.84
PHGDH-229ENST00000641891 HMG20BQ9P0W2 317 aa20.27■□□□□ 0.84
PHGDH-229ENST00000641891 LRP6O75581 1613 aa20.27■□□□□ 0.83
PHGDH-229ENST00000641891 ZBTB38Q8NAP3 1195 aaPredicted RBP20.27■□□□□ 0.83
PHGDH-229ENST00000641891 RRAGDQ9NQL2 400 aaPredicted RBP20.27■□□□□ 0.83
PHGDH-229ENST00000641891 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.83
PHGDH-229ENST00000641891 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.83
PHGDH-229ENST00000641891 TCHHQ07283 1943 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 EXOC5O00471 708 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 MBD3O95983 291 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 ADORA1P30542 326 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
PHGDH-229ENST00000641891 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
PHGDH-229ENST00000641891 KAT6BQ8WYB5 2073 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 SH3TC1Q8TE82 1336 aa20.26■□□□□ 0.83
PHGDH-229ENST00000641891 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-229ENST00000641891 F13A1P00488 732 aa20.25■□□□□ 0.83
PHGDH-229ENST00000641891 IFIT1P09914 478 aaKnown RBP20.25■□□□□ 0.83
PHGDH-229ENST00000641891 NASPP49321 788 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-229ENST00000641891 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
PHGDH-229ENST00000641891 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
PHGDH-229ENST00000641891 SYCE3A1L190 88 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms