RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
PHGDH-228ENST00000641847 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
PHGDH-228ENST00000641847 NOGQ13253 232 aa11.98□□□□□ -0.49
PHGDH-228ENST00000641847 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
PHGDH-228ENST00000641847 STK31Q9BXU1 1019 aa11.98□□□□□ -0.49
PHGDH-228ENST00000641847 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
PHGDH-228ENST00000641847 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-228ENST00000641847 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
PHGDH-228ENST00000641847 SUPT16HQ9Y5B9 1047 aaKnown RBP11.98□□□□□ -0.49
PHGDH-228ENST00000641847 ANKRD31Q8N7Z5 1873 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 THSD7BQ9C0I4 1608 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 KIF16BQ96L93 1317 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 EPS15P42566 896 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 SOX10P56693 466 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 GCC1Q96CN9 775 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
PHGDH-228ENST00000641847 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 CACNA1FO60840 1977 aa11.97□□□□□ -0.49
PHGDH-228ENST00000641847 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-228ENST00000641847 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
PHGDH-228ENST00000641847 KLRG2A4D1S0 409 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-228ENST00000641847 SCNN1DP51172 638 aa11.96□□□□□ -0.49
PHGDH-228ENST00000641847 FMR1Q06787 632 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■□□□□ 9.8
PHGDH-228ENST00000641847 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
PHGDH-228ENST00000641847 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
PHGDH-228ENST00000641847 ANXA1P04083 346 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-228ENST00000641847 FRAT1Q92837 279 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-228ENST00000641847 ZNF408Q9H9D4 720 aa11.95□□□□□ -0.5
PHGDH-228ENST00000641847 DBF4Q9UBU7 674 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-228ENST00000641847 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
PHGDH-228ENST00000641847 PLIN1O60240 522 aa11.94□□□□□ -0.5
PHGDH-228ENST00000641847 A1BGP04217 495 aa11.94□□□□□ -0.5
PHGDH-228ENST00000641847 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-228ENST00000641847 RPGRQ92834 1020 aaKnown RBP11.94□□□□□ -0.5
PHGDH-228ENST00000641847 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
PHGDH-228ENST00000641847 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
PHGDH-228ENST00000641847 RGL2O15211 777 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 MYL6BP14649 208 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 PDIA6Q15084 440 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 CDC37L1Q7L3B6 337 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 G2E3Q7L622 706 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
PHGDH-228ENST00000641847 HYPKQ9NX55 129 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 SCN7AQ01118 1682 aa11.93□□□□□ -0.5
PHGDH-228ENST00000641847 ARFGEF2Q9Y6D5 1785 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 PTPRCP08575 1304 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
PHGDH-228ENST00000641847 HUNKP57058 714 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 FLIIQ13045 1269 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
PHGDH-228ENST00000641847 CCDC102AQ96A19 550 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 GLIS2Q9BZE0 524 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-228ENST00000641847 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
PHGDH-228ENST00000641847 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
PHGDH-228ENST00000641847 TRIM27P14373 513 aa11.91□□□□□ -0.5
PHGDH-228ENST00000641847 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-228ENST00000641847 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
PHGDH-228ENST00000641847 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
PHGDH-228ENST00000641847 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
PHGDH-228ENST00000641847 VPS33BQ9H267 617 aa11.91□□□□□ -0.5
PHGDH-228ENST00000641847 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
PHGDH-228ENST00000641847 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 NEFLP07196 543 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 CACNA1SQ13698 1873 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 CTU1Q7Z7A3 348 aaKnown RBP11.9□□□□□ -0.5
PHGDH-228ENST00000641847 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
PHGDH-228ENST00000641847 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
PHGDH-228ENST00000641847 ABCC4O15439 1325 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-228ENST00000641847 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
PHGDH-228ENST00000641847 TNIP1Q15025 636 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
PHGDH-228ENST00000641847 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 C2orf69Q8N8R5 385 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
PHGDH-228ENST00000641847 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
PHGDH-228ENST00000641847 H7C1D1 291 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-228ENST00000641847 TRPA1O75762 1119 aa11.88□□□□□ -0.51
PHGDH-228ENST00000641847 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms