RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 NUDCQ9Y266 331 aa9.79□□□□□ -0.84
PHGDH-225ENST00000641720 TRIOBPQ9H2D6 2365 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 EGFRP00533 1210 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-225ENST00000641720 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 GRM1Q13255 1194 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 DCTN1Q14203 1278 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 MCM10Q7L590 875 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 MIER1Q8N108 512 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 ZNF609O15014 1411 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 ABCC4O15439 1325 aa9.78□□□□□ -0.84
PHGDH-225ENST00000641720 COL6A3P12111 3177 aa9.77□□□□□ -0.84
PHGDH-225ENST00000641720 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-225ENST00000641720 NPHP1O15259 732 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 KCNA4P22459 653 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 SOX10P56693 466 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 NOGQ13253 232 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 GRIPAP1Q4V328 841 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 PRPF38BQ5VTL8 546 aaKnown RBP9.77□□□□□ -0.85
PHGDH-225ENST00000641720 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
PHGDH-225ENST00000641720 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 VPS33BQ9H267 617 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 ATP6V0A2Q9Y487 856 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 OTOFQ9HC10 1997 aa9.77□□□□□ -0.85
PHGDH-225ENST00000641720 PPIP5K2O43314 1243 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 KIAA2012Q0VF49 1180 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 SLC10A5Q5PT55 438 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 PAXIP1Q6ZW49 1069 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-225ENST00000641720 NIM1KQ8IY84 436 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 PLEKHF1Q96S99 279 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 SAGE1Q9NXZ1 904 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 LAMA3Q16787 3333 aa9.76□□□□□ -0.85
PHGDH-225ENST00000641720 RTL9Q8NET4 1388 aa9.75□□□□□ -0.85
PHGDH-225ENST00000641720 GPTP24298 496 aa9.75□□□□□ -0.85
PHGDH-225ENST00000641720 WDR43Q15061 677 aaKnown RBP eCLIP9.75□□□□□ -0.85
PHGDH-225ENST00000641720 PDIA6Q15084 440 aa9.75□□□□□ -0.85
PHGDH-225ENST00000641720 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
PHGDH-225ENST00000641720 PNISRQ8TF01 805 aaKnown RBP9.75□□□□□ -0.85
PHGDH-225ENST00000641720 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
PHGDH-225ENST00000641720 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
PHGDH-225ENST00000641720 EIF4A1P60842 406 aaKnown RBP9.74□□□□□ -0.85
PHGDH-225ENST00000641720 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
PHGDH-225ENST00000641720 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
PHGDH-225ENST00000641720 RNF186Q9NXI6 227 aa9.74□□□□□ -0.85
PHGDH-225ENST00000641720 CCER2I3L3R5 266 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
PHGDH-225ENST00000641720 RAD17O75943 681 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 SLC10A3P09131 477 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 HUNKP57058 714 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 KIF23Q02241 960 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-225ENST00000641720 RGMBQ6NW40 437 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
PHGDH-225ENST00000641720 RBM17Q96I25 401 aaKnown RBP9.73□□□□□ -0.85
PHGDH-225ENST00000641720 CSRNP1Q96S65 589 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 MIS18AQ9NYP9 233 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 A0A0C4DFX4 3053 aa9.73□□□□□ -0.85
PHGDH-225ENST00000641720 ZSWIM8A7E2V4 1837 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 TAF7Q15545 349 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-225ENST00000641720 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 NPM2Q86SE8 214 aaKnown RBP9.72□□□□□ -0.85
PHGDH-225ENST00000641720 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 DPF2Q92785 391 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
PHGDH-225ENST00000641720 CNOT7Q9UIV1 285 aaKnown RBP9.72□□□□□ -0.85
PHGDH-225ENST00000641720 ASTN2O75129 1339 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-225ENST00000641720 ADM5C9JUS6 153 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
PHGDH-225ENST00000641720 PROSER3Q2NL68 480 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 MICALL2Q8IY33 904 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 ZNF408Q9H9D4 720 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 GBA2Q9HCG7 927 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-225ENST00000641720 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-225ENST00000641720 HPS5Q9UPZ3 1129 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-225ENST00000641720 ERBB4Q15303 1308 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 MAPK8IP3Q9UPT6 1336 aa9.71□□□□□ -0.86
PHGDH-225ENST00000641720 PSMD14O00487 310 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 TRPA1O75762 1119 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 NFE2L2Q16236 605 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 CTU1Q7Z7A3 348 aaKnown RBP9.7□□□□□ -0.86
PHGDH-225ENST00000641720 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 RUNDC1Q96C34 613 aa9.7□□□□□ -0.86
PHGDH-225ENST00000641720 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
PHGDH-225ENST00000641720 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-225ENST00000641720 PARP10Q53GL7 1025 aa9.69□□□□□ -0.86
PHGDH-225ENST00000641720 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-225ENST00000641720 NLRP10Q86W26 655 aa9.69□□□□□ -0.86
PHGDH-225ENST00000641720 MPNDQ8N594 471 aa9.69□□□□□ -0.86
PHGDH-225ENST00000641720 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
PHGDH-225ENST00000641720 SUPT20HQ8NEM7 779 aa9.69□□□□□ -0.86
PHGDH-225ENST00000641720 BBOX1O75936 387 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 MYL6BP14649 208 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 GRAPQ13588 217 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 TNIP1Q15025 636 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms