RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.17
PHGDH-220ENST00000641570 CEP85Q6P2H3 762 aa16.08■□□□□ 0.16
PHGDH-220ENST00000641570 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
PHGDH-220ENST00000641570 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■■□□ 15.2
PHGDH-220ENST00000641570 PPP4R2Q9NY27 417 aa16.08■□□□□ 0.16
PHGDH-220ENST00000641570 ITGA6P23229 1130 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 CASP7P55210 303 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 G3BP1Q13283 466 aaKnown RBP eCLIP16.07■□□□□ 0.168e-8■■■■□ 22.6
PHGDH-220ENST00000641570 FAM161AQ3B820 660 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 SYNE4Q8N205 404 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 ANKRD44Q8N8A2 993 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 CASZ1Q86V15 1759 aa16.07■□□□□ 0.16
PHGDH-220ENST00000641570 NPR1P16066 1061 aa16.06■□□□□ 0.16
PHGDH-220ENST00000641570 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
PHGDH-220ENST00000641570 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
PHGDH-220ENST00000641570 TTLL11Q8NHH1 800 aa16.06■□□□□ 0.16
PHGDH-220ENST00000641570 FOXO4P98177 505 aa16.05■□□□□ 0.16
PHGDH-220ENST00000641570 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
PHGDH-220ENST00000641570 RABL6Q3YEC7 729 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-220ENST00000641570 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
PHGDH-220ENST00000641570 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
PHGDH-220ENST00000641570 GREM2Q9H772 168 aa16.05■□□□□ 0.16
PHGDH-220ENST00000641570 C10orf71Q711Q0 1435 aa16.04■□□□□ 0.16
PHGDH-220ENST00000641570 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
PHGDH-220ENST00000641570 MTX1Q13505 466 aa16.04■□□□□ 0.16
PHGDH-220ENST00000641570 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
PHGDH-220ENST00000641570 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
PHGDH-220ENST00000641570 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
PHGDH-220ENST00000641570 CSF1RP07333 972 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 TGFB2P61812 414 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 GRAPQ13588 217 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 EPHA10Q5JZY3 1008 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 GRAPLQ8TC17 118 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-220ENST00000641570 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 SIL1Q9H173 461 aa16.03■□□□□ 0.16
PHGDH-220ENST00000641570 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
PHGDH-220ENST00000641570 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-220ENST00000641570 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
PHGDH-220ENST00000641570 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
PHGDH-220ENST00000641570 PCDHB15Q9Y5E8 787 aa16.02■□□□□ 0.16
PHGDH-220ENST00000641570 PNMA6EA0A0J9YXQ4 647 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 APBB1O00213 710 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-220ENST00000641570 PTGER2P43116 358 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 KCNJ4P48050 445 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
PHGDH-220ENST00000641570 RAB11FIP3O75154 756 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 BBOX1O75936 387 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 SRGNP10124 158 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
PHGDH-220ENST00000641570 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
PHGDH-220ENST00000641570 METTL24Q5JXM2 366 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
PHGDH-220ENST00000641570 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 FBXO3Q9UK99 471 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 LAMB2P55268 1798 aa16■□□□□ 0.15
PHGDH-220ENST00000641570 CHRNA5P30532 468 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 POLA2Q14181 598 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 TTLL6Q8N841 843 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 PIM2Q9P1W9 311 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
PHGDH-220ENST00000641570 MROH5Q6ZUA9 1318 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 KLRG2A4D1S0 409 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-220ENST00000641570 EYA2O00167 538 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 CIAO1O76071 339 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 DPEP1P16444 411 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
PHGDH-220ENST00000641570 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 ZNF594Q96JF6 807 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-220ENST00000641570 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
PHGDH-220ENST00000641570 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
PHGDH-220ENST00000641570 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
PHGDH-220ENST00000641570 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-220ENST00000641570 KLHDC4Q8TBB5 520 aa15.97■□□□□ 0.15
PHGDH-220ENST00000641570 SGIP1Q9BQI5 828 aa15.97■□□□□ 0.15
PHGDH-220ENST00000641570 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
PHGDH-220ENST00000641570 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-220ENST00000641570 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
PHGDH-220ENST00000641570 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
PHGDH-220ENST00000641570 PTPN12Q05209 780 aaKnown RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 GPATCH3Q96I76 525 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms