RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 MPNDQ8N594 471 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 CSRNP1Q96S65 589 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
PHGDH-217ENST00000641455 IBTKQ9P2D0 1353 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-217ENST00000641455 ERVV-1B6SEH8 477 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 PRKAR2BP31323 418 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 MCM10Q7L590 875 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-217ENST00000641455 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
PHGDH-217ENST00000641455 ABCC4O15439 1325 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
PHGDH-217ENST00000641455 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
PHGDH-217ENST00000641455 MYL6BP14649 208 aa10.48□□□□□ -0.73
PHGDH-217ENST00000641455 TTLL7Q6ZT98 887 aa10.48□□□□□ -0.73
PHGDH-217ENST00000641455 PPP1R42Q7Z4L9 355 aa10.48□□□□□ -0.73
PHGDH-217ENST00000641455 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
PHGDH-217ENST00000641455 ZNF296Q8WUU4 475 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-217ENST00000641455 RTFDC1Q9BY42 306 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-217ENST00000641455 YDJCA8MPS7 323 aa10.47□□□□□ -0.73
PHGDH-217ENST00000641455 NTSR2O95665 410 aa10.47□□□□□ -0.73
PHGDH-217ENST00000641455 RASAL3Q86YV0 1011 aa10.47□□□□□ -0.73
PHGDH-217ENST00000641455 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-217ENST00000641455 PHACTR3Q96KR7 559 aa10.47□□□□□ -0.73
PHGDH-217ENST00000641455 COL3A1P02461 1466 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-217ENST00000641455 PSMD14O00487 310 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 TBC1D8O95759 1140 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 EGFRP00533 1210 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-217ENST00000641455 SP8Q8IXZ3 490 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 DPF2Q92785 391 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 DBNDD1Q9H9R9 158 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
PHGDH-217ENST00000641455 BBOX1O75936 387 aa10.45□□□□□ -0.74
PHGDH-217ENST00000641455 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
PHGDH-217ENST00000641455 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
PHGDH-217ENST00000641455 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
PHGDH-217ENST00000641455 ZNF34Q8IZ26 560 aa10.45□□□□□ -0.74
PHGDH-217ENST00000641455 UTP14AQ9BVJ6 771 aaKnown RBP10.45□□□□□ -0.74
PHGDH-217ENST00000641455 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
PHGDH-217ENST00000641455 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
PHGDH-217ENST00000641455 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
PHGDH-217ENST00000641455 GPR25O00155 361 aa10.43□□□□□ -0.74
PHGDH-217ENST00000641455 RPS12P25398 132 aaKnown RBP10.43□□□□□ -0.74
PHGDH-217ENST00000641455 FXR1P51114 621 aaKnown RBP eCLIP10.43□□□□□ -0.74
PHGDH-217ENST00000641455 GRAPQ13588 217 aa10.43□□□□□ -0.74
PHGDH-217ENST00000641455 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-217ENST00000641455 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
PHGDH-217ENST00000641455 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
PHGDH-217ENST00000641455 GRAPLQ8TC17 118 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-217ENST00000641455 TIMELESSQ9UNS1 1208 aa10.43□□□□□ -0.74
PHGDH-217ENST00000641455 LAMB2P55268 1798 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 ASTN2O75129 1339 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 ECE2O60344 883 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 FKTNO75072 461 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 ANGEL2Q5VTE6 544 aaKnown RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 NSFL1CQ9UNZ2 370 aaKnown RBP10.42□□□□□ -0.74
PHGDH-217ENST00000641455 DUOX1Q9NRD9 1551 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 PAPPA2Q9BXP8 1791 aa10.42□□□□□ -0.74
PHGDH-217ENST00000641455 TAF1P21675 1872 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 G3V3G9 751 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 U2AF1L5P0DN76 240 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-217ENST00000641455 FKBP1BP68106 108 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 U2AF1Q01081 240 aaKnown RBP eCLIP10.41□□□□□ -0.74
PHGDH-217ENST00000641455 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 MOB2Q70IA6 237 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 NUDCQ9Y266 331 aa10.41□□□□□ -0.74
PHGDH-217ENST00000641455 ANKRD36CQ5JPF3 1778 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 POTEFA5A3E0 1075 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 UBE2Q2LH0YL09 131 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 PNISRQ8TF01 805 aaKnown RBP10.4□□□□□ -0.74
PHGDH-217ENST00000641455 EYA3Q99504 573 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
PHGDH-217ENST00000641455 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 TRIM17Q9Y577 477 aa10.4□□□□□ -0.74
PHGDH-217ENST00000641455 DDX60Q8IY21 1712 aaKnown RBP10.4□□□□□ -0.74
PHGDH-217ENST00000641455 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
PHGDH-217ENST00000641455 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
PHGDH-217ENST00000641455 SREBF2Q12772 1141 aa10.39□□□□□ -0.75
PHGDH-217ENST00000641455 SCARF1Q14162 830 aa10.39□□□□□ -0.75
PHGDH-217ENST00000641455 ZNF428Q96B54 188 aa10.39□□□□□ -0.75
PHGDH-217ENST00000641455 TRMT112Q9UI30 125 aaKnown RBP10.39□□□□□ -0.75
PHGDH-217ENST00000641455 SCAF8Q9UPN6 1271 aaKnown RBP10.39□□□□□ -0.75
PHGDH-217ENST00000641455 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
PHGDH-217ENST00000641455 HSP90AB3PQ58FF7 597 aa10.38□□□□□ -0.75
PHGDH-217ENST00000641455 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
PHGDH-217ENST00000641455 INTS3Q68E01 1043 aaKnown RBP10.38□□□□□ -0.75
PHGDH-217ENST00000641455 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms