RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CEP85Q6P2H3 762 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 RPAP2Q8IXW5 612 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-225ENST00000640900 TTLL11Q8NHH1 800 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 JARID2Q92833 1246 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-225ENST00000640900 BICC1Q9H694 974 aaKnown RBP11.44□□□□□ -0.58
SCARB2-225ENST00000640900 ANKRD31Q8N7Z5 1873 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
SCARB2-225ENST00000640900 MYH3P11055 1940 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-225ENST00000640900 NEFLP07196 543 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-225ENST00000640900 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 CNBD1Q8NA66 436 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SCARB2-225ENST00000640900 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
SCARB2-225ENST00000640900 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
SCARB2-225ENST00000640900 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
SCARB2-225ENST00000640900 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-225ENST00000640900 CTSWP56202 376 aa11.42□□□□□ -0.58
SCARB2-225ENST00000640900 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-225ENST00000640900 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SCARB2-225ENST00000640900 PNMA6EA0A0J9YXQ4 647 aa11.41□□□□□ -0.58
SCARB2-225ENST00000640900 HOXA10P31260 410 aaPredicted RBP11.41□□□□□ -0.58
SCARB2-225ENST00000640900 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
SCARB2-225ENST00000640900 LMBR1LQ6UX01 489 aa11.41□□□□□ -0.58
SCARB2-225ENST00000640900 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SCARB2-225ENST00000640900 LRP5O75197 1615 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 FAM177BA6PVY3 158 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 ST5P78524 1137 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
SCARB2-225ENST00000640900 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
SCARB2-225ENST00000640900 KDM2BQ8NHM5 1336 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 PTPN12Q05209 780 aaKnown RBP11.39□□□□□ -0.59
SCARB2-225ENST00000640900 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 GREM2Q9H772 168 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 DCTPP1Q9H773 170 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 COPRSQ9NQ92 184 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 COL4A1P02462 1669 aa11.39□□□□□ -0.59
SCARB2-225ENST00000640900 IGHDP01880 384 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 SRGNP10124 158 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
SCARB2-225ENST00000640900 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-225ENST00000640900 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 KCNA3P22001 575 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 POLD1P28340 1107 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-225ENST00000640900 PDE6BP35913 854 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 SMC5Q8IY18 1101 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
SCARB2-225ENST00000640900 DLEC1Q9Y238 1755 aa11.36□□□□□ -0.59
SCARB2-225ENST00000640900 HMMRO75330 724 aa11.36□□□□□ -0.59
SCARB2-225ENST00000640900 ITGA6P23229 1130 aa11.36□□□□□ -0.59
SCARB2-225ENST00000640900 TGFB2P61812 414 aa11.36□□□□□ -0.59
SCARB2-225ENST00000640900 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
SCARB2-225ENST00000640900 CIAO1O76071 339 aa11.35□□□□□ -0.59
SCARB2-225ENST00000640900 NPR1P16066 1061 aa11.35□□□□□ -0.59
SCARB2-225ENST00000640900 IFIT5Q13325 482 aaKnown RBP11.35□□□□□ -0.59
SCARB2-225ENST00000640900 STYK1Q6J9G0 422 aa11.35□□□□□ -0.59
SCARB2-225ENST00000640900 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
SCARB2-225ENST00000640900 RWDD1Q9H446 243 aaPredicted RBP11.35□□□□□ -0.59
SCARB2-225ENST00000640900 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
SCARB2-225ENST00000640900 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 ANKRD18BA2A2Z9 1011 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 RPS8P62241 208 aaKnown RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 GRAPQ13588 217 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 CCDC57Q2TAC2 916 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 GRAPLQ8TC17 118 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 C7orf43Q8WVR3 580 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 CELF1Q92879 486 aaKnown RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 MASTLQ96GX5 879 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
SCARB2-225ENST00000640900 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 TAF1P21675 1872 aa11.34□□□□□ -0.59
SCARB2-225ENST00000640900 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
SCARB2-225ENST00000640900 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 EYA2O00167 538 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 BBOX1O75936 387 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
SCARB2-225ENST00000640900 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 GCC1Q96CN9 775 aa11.33□□□□□ -0.6
SCARB2-225ENST00000640900 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms