RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 PMFBP1Q8TBY8 1022 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 INSM2Q96T92 566 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 NPHS2Q9NP85 383 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 GPC6Q9Y625 555 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 J3QL48 77 aa9.83□□□□□ -0.84
SCARB2-224ENST00000640880 INPP5BP32019 993 aa9.83□□□□□ -0.84
SCARB2-224ENST00000640880 ELP3Q9H9T3 547 aa9.83□□□□□ -0.84
SCARB2-224ENST00000640880 PKD2L1Q9P0L9 805 aa9.83□□□□□ -0.84
SCARB2-224ENST00000640880 POLR3DP05423 398 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-224ENST00000640880 ST13P50502 369 aaKnown RBP9.82□□□□□ -0.84
SCARB2-224ENST00000640880 NXPE4Q6UWF7 544 aa9.82□□□□□ -0.84
SCARB2-224ENST00000640880 BTLAQ7Z6A9 289 aa9.82□□□□□ -0.84
SCARB2-224ENST00000640880 NEUROD4Q9HD90 331 aa9.82□□□□□ -0.84
SCARB2-224ENST00000640880 POLMQ9NP87 494 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-224ENST00000640880 TMEM63CQ9P1W3 806 aa9.82□□□□□ -0.84
SCARB2-224ENST00000640880 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
SCARB2-224ENST00000640880 TTC24A2A3L6 582 aaPredicted RBP9.81□□□□□ -0.84
SCARB2-224ENST00000640880 SPATA31C2B4DYI2 1134 aa9.81□□□□□ -0.84
SCARB2-224ENST00000640880 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
SCARB2-224ENST00000640880 MCF2L2Q86YR7 1114 aa9.81□□□□□ -0.84
SCARB2-224ENST00000640880 BCO2Q9BYV7 579 aa9.81□□□□□ -0.84
SCARB2-224ENST00000640880 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
SCARB2-224ENST00000640880 TMA7Q9Y2S6 64 aaKnown RBP9.81□□□□□ -0.84
SCARB2-224ENST00000640880 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
SCARB2-224ENST00000640880 CFTRP13569 1480 aa9.8□□□□□ -0.84
SCARB2-224ENST00000640880 GADD45BO75293 160 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-224ENST00000640880 ATP4AP20648 1035 aa9.8□□□□□ -0.84
SCARB2-224ENST00000640880 RBL2Q08999 1139 aa9.8□□□□□ -0.84
SCARB2-224ENST00000640880 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
SCARB2-224ENST00000640880 HIRIP3Q9BW71 556 aaPredicted RBP9.8□□□□□ -0.84
SCARB2-224ENST00000640880 STK10O94804 968 aaKnown RBP9.79□□□□□ -0.84
SCARB2-224ENST00000640880 FGRP09769 529 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
SCARB2-224ENST00000640880 GJA8P48165 433 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 PAK2Q13177 524 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 ERMP1Q7Z2K6 904 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
SCARB2-224ENST00000640880 COPRSQ9NQ92 184 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
SCARB2-224ENST00000640880 ANKRD62A6NC57 917 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 SPINT1O43278 529 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 POU4F2Q12837 409 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 ARSJQ5FYB0 599 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-224ENST00000640880 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 PCGF6Q9BYE7 350 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 CHRDQ9H2X0 955 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 ZSWIM4Q9H7M6 989 aa9.78□□□□□ -0.84
SCARB2-224ENST00000640880 EREGO14944 169 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 EPB42P16452 691 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 ATF4P18848 351 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-224ENST00000640880 CTSOP43234 321 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-224ENST00000640880 SOGA3Q5TF21 947 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 CYP4X1Q8N118 509 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 GPRASP2Q96D09 838 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 ZIC5Q96T25 663 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 PIF1Q9H611 641 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
SCARB2-224ENST00000640880 XYLBO75191 536 aa9.76□□□□□ -0.85
SCARB2-224ENST00000640880 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
SCARB2-224ENST00000640880 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
SCARB2-224ENST00000640880 SUV39H2Q9H5I1 410 aa9.76□□□□□ -0.85
SCARB2-224ENST00000640880 CNTN3Q9P232 1028 aa9.76□□□□□ -0.85
SCARB2-224ENST00000640880 TTF2Q9UNY4 1162 aaKnown RBP9.76□□□□□ -0.85
SCARB2-224ENST00000640880 GRNP28799 593 aaKnown RBP9.75□□□□□ -0.85
SCARB2-224ENST00000640880 GRM2Q14416 872 aa9.75□□□□□ -0.85
SCARB2-224ENST00000640880 LINC00528Q8N1L1 170 aa9.75□□□□□ -0.85
SCARB2-224ENST00000640880 KBTBD4Q9NVX7 518 aa9.75□□□□□ -0.85
SCARB2-224ENST00000640880 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-224ENST00000640880 THOC2Q8NI27 1593 aaKnown RBP9.75□□□□□ -0.85
SCARB2-224ENST00000640880 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 SMPD1P17405 629 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 GSTT1P30711 240 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 TYRO3Q06418 890 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 CEP63Q96MT8 703 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 OSBPL2Q9H1P3 480 aa9.74□□□□□ -0.85
SCARB2-224ENST00000640880 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
SCARB2-224ENST00000640880 UPP2O95045 317 aa9.73□□□□□ -0.85
SCARB2-224ENST00000640880 MSX1P28360 303 aa9.73□□□□□ -0.85
SCARB2-224ENST00000640880 ZEB1P37275 1124 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-224ENST00000640880 GJA3Q9Y6H8 435 aa9.73□□□□□ -0.85
SCARB2-224ENST00000640880 CUX2O14529 1486 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 A0A1B0GTH6 734 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 A0A1W2PNR3 127 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 CES1P23141 567 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 LYSMD3Q7Z3D4 306 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 HPS1Q92902 700 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 SPON2Q9BUD6 331 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 NOC4LQ9BVI4 516 aaKnown RBP9.72□□□□□ -0.85
SCARB2-224ENST00000640880 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 TOR4AQ9NXH8 423 aa9.72□□□□□ -0.85
SCARB2-224ENST00000640880 POTECB2RU33 542 aa9.71□□□□□ -0.86
SCARB2-224ENST00000640880 BMS1Q14692 1282 aaKnown RBP9.71□□□□□ -0.86
SCARB2-224ENST00000640880 TTC39BQ5VTQ0 682 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-224ENST00000640880 ZNF662Q6ZS27 426 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms