RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 UTP14AQ9BVJ6 771 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
ERGIC3-220ENST00000640748 AOC3Q16853 763 aa15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 NLRP3Q96P20 1036 aa15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 DDX21Q9NR30 783 aaKnown RBP eCLIP15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 BABAM1Q9NWV8 329 aa15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 ABCC4O15439 1325 aa15.16■□□□□ 0.02
ERGIC3-220ENST00000640748 BCAR3O75815 825 aa15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 CTCFP49711 727 aaPredicted RBP15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 RTFDC1Q9BY42 306 aaPredicted RBP15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-220ENST00000640748 TRAF5O00463 557 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 PPIP5K2O43314 1243 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 KRT24Q2M2I5 525 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 CST9Q5W186 159 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 XAGE3Q8WTP9 111 aa15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-220ENST00000640748 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 LBX1P52954 281 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 CXCL9Q07325 125 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 USP50Q70EL3 339 aaPredicted RBP15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 CRBNQ96SW2 442 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 GPRC5DQ9NZD1 345 aa15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 ABT1Q9ULW3 272 aaKnown RBP15.13■□□□□ 0.01
ERGIC3-220ENST00000640748 LAMB2P55268 1798 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 CHL1O00533 1208 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 HSPA8P11142 646 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
ERGIC3-220ENST00000640748 THSD7BQ9C0I4 1608 aa15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 BBOX1O75936 387 aa15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 AIMP1Q12904 312 aaKnown RBP15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 SP8Q8IXZ3 490 aa15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 ANKRD36CQ5JPF3 1778 aa15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
ERGIC3-220ENST00000640748 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 HSP90AB3PQ58FF7 597 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 CAPNS2Q96L46 248 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 ADARB2Q9NS39 739 aaKnown RBP15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
ERGIC3-220ENST00000640748 MAP2K1Q02750 393 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 GRAPQ13588 217 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 MPNDQ8N594 471 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 PGAP2Q9UHJ9 254 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 COL4A1P02462 1669 aa15.09■□□□□ 0.01
ERGIC3-220ENST00000640748 SHTN1A0MZ66 631 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 YDJCA8MPS7 323 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 HIRAP54198 1017 aaPredicted RBP15.08■□□□□ 0
ERGIC3-220ENST00000640748 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 CYP4F22Q6NT55 531 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 TLL2Q9Y6L7 1015 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 TAF1P21675 1872 aa15.08■□□□□ 0
ERGIC3-220ENST00000640748 RAD17O75943 681 aa15.07■□□□□ 0
ERGIC3-220ENST00000640748 MS4A1P11836 297 aa15.07■□□□□ 0
ERGIC3-220ENST00000640748 CIAPIN1Q6FI81 312 aa15.07■□□□□ 0
ERGIC3-220ENST00000640748 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
ERGIC3-220ENST00000640748 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
ERGIC3-220ENST00000640748 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
ERGIC3-220ENST00000640748 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
ERGIC3-220ENST00000640748 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
ERGIC3-220ENST00000640748 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 TRPM7Q96QT4 1865 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 SAPCD2Q86UD0 394 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 PLBD2Q8NHP8 589 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 TRPM4Q8TD43 1214 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
ERGIC3-220ENST00000640748 ISCA1Q9BUE6 129 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 BCL2L13Q9BXK5 485 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 CDHR2Q9BYE9 1310 aa15.06■□□□□ 0
ERGIC3-220ENST00000640748 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
ERGIC3-220ENST00000640748 VAMP4O75379 141 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms