RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 CREB3L3Q68CJ9 461 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 CNNM3Q8NE01 707 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 TANGO6Q9C0B7 1094 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 KLHL10Q6JEL2 608 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 IQSEC3Q9UPP2 1182 aaPredicted RBP20.4■□□□□ 0.86
SCARB2-223ENST00000640640 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 C6orf229H3BNL8 230 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 USP48Q86UV5 1035 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 NBPF5PQ86XG9 351 aaPredicted RBP20.4■□□□□ 0.86
SCARB2-223ENST00000640640 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
SCARB2-223ENST00000640640 ARHGEF10O15013 1369 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 GIMAP6Q6P9H5 292 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 LRSAM1Q6UWE0 723 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 INTS4Q96HW7 963 aaKnown RBP20.4■□□□□ 0.86
SCARB2-223ENST00000640640 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 METP08581 1390 aa20.4■□□□□ 0.86
SCARB2-223ENST00000640640 TMOD2Q9NZR1 351 aa20.39■□□□□ 0.86
SCARB2-223ENST00000640640 NIP7Q9Y221 180 aaKnown RBP eCLIP20.39■□□□□ 0.86
SCARB2-223ENST00000640640 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
SCARB2-223ENST00000640640 F13A1P00488 732 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 DEF6Q9H4E7 631 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 LDHCP07864 332 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.85
SCARB2-223ENST00000640640 XRCC6P12956 609 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCARB2-223ENST00000640640 NLRP5P59047 1200 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 AK7Q96M32 723 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 SLC26A6Q9BXS9 759 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 CFAP74Q9C0B2 1584 aa20.39■□□□□ 0.85
SCARB2-223ENST00000640640 TSPY2A6NKD2 308 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
SCARB2-223ENST00000640640 ABCC4O15439 1325 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 BIN1O00499 593 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 CLIP2Q9UDT6 1046 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 SYNMO15061 1565 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 RAD50Q92878 1312 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 CCDC194A0A1B0GVG4 234 aa20.38■□□□□ 0.85
SCARB2-223ENST00000640640 EIF4A1P60842 406 aaKnown RBP20.38■□□□□ 0.85
SCARB2-223ENST00000640640 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
SCARB2-223ENST00000640640 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 ZBTB43O43298 467 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 ADCY5O95622 1261 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 SMARCC1Q92922 1105 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-223ENST00000640640 RFC4P35249 363 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 PDE4BQ07343 736 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
SCARB2-223ENST00000640640 SLF2Q8IX21 1173 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
SCARB2-223ENST00000640640 BAG3O95817 575 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 CYP7A1P22680 504 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 PLBD2Q8NHP8 589 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 KLHDC4Q8TBB5 520 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 WTAPQ15007 396 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 NLRP3Q96P20 1036 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 LUC7LQ9NQ29 371 aaKnown RBP20.36■□□□□ 0.85
SCARB2-223ENST00000640640 SLC52A2Q9HAB3 445 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
SCARB2-223ENST00000640640 CAVIN2O95810 425 aa20.36■□□□□ 0.85
SCARB2-223ENST00000640640 HELBQ8NG08 1087 aaPredicted RBP20.36■□□□□ 0.85
SCARB2-223ENST00000640640 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
SCARB2-223ENST00000640640 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
SCARB2-223ENST00000640640 TIMM10P62072 90 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 STX1AQ16623 288 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 UVSSAQ2YD98 709 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 ERCC4Q92889 916 aaPredicted RBP20.35■□□□□ 0.85
SCARB2-223ENST00000640640 ZNF76P36508 570 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
SCARB2-223ENST00000640640 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
SCARB2-223ENST00000640640 PANK2Q9BZ23 570 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 KRT23Q9C075 422 aa20.35■□□□□ 0.85
SCARB2-223ENST00000640640 KIF5BP33176 963 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 UTP14AQ9BVJ6 771 aaKnown RBP20.34■□□□□ 0.85
SCARB2-223ENST00000640640 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-223ENST00000640640 NOM1Q5C9Z4 860 aaKnown RBP20.34■□□□□ 0.85
SCARB2-223ENST00000640640 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 SLC4A4Q9Y6R1 1079 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
SCARB2-223ENST00000640640 CPA1P15085 419 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 PTPN14Q15678 1187 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 CHD1O14646 1710 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 TOM1O60784 492 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 ODF2Q5BJF6 829 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
SCARB2-223ENST00000640640 PRC1O43663 620 aa20.33■□□□□ 0.85
SCARB2-223ENST00000640640 ALG1Q9BT22 464 aa20.33■□□□□ 0.85
SCARB2-223ENST00000640640 CRNKL1Q9BZJ0 848 aaKnown RBP20.33■□□□□ 0.85
SCARB2-223ENST00000640640 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
SCARB2-223ENST00000640640 TOP1P11387 765 aaKnown RBP20.33■□□□□ 0.85
SCARB2-223ENST00000640640 TMTC2Q8N394 836 aa20.33■□□□□ 0.85
SCARB2-223ENST00000640640 DACT1Q9NYF0 836 aa20.33■□□□□ 0.85
SCARB2-223ENST00000640640 FAM135BQ49AJ0 1406 aa20.33■□□□□ 0.84
SCARB2-223ENST00000640640 EYA2O00167 538 aa20.33■□□□□ 0.84
SCARB2-223ENST00000640640 ARHGAP29Q52LW3 1261 aa20.33■□□□□ 0.84
SCARB2-223ENST00000640640 DHX32Q7L7V1 743 aaKnown RBP20.33■□□□□ 0.84
SCARB2-223ENST00000640640 ESR2Q92731 530 aa20.33■□□□□ 0.84
SCARB2-223ENST00000640640 CHST3Q7LGC8 479 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms