RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 FHDC1Q9C0D6 1143 aaPredicted RBP27■■□□□ 1.91
TSPAN9-208ENST00000640568 C1orf115Q9H7X2 142 aa27■■□□□ 1.91
TSPAN9-208ENST00000640568 FOXO4P98177 505 aa27■■□□□ 1.91
TSPAN9-208ENST00000640568 KIAA1551Q9HCM1 1747 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 KLRG2A4D1S0 409 aaPredicted RBP26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 EPHA10Q5JZY3 1008 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 LMBR1LQ6UX01 489 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 TTLL11Q8NHH1 800 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 KAZALD1Q96I82 304 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 ZBTB40Q9NUA8 1239 aa26.99■■□□□ 1.91
TSPAN9-208ENST00000640568 CHRNA5P30532 468 aa26.98■■□□□ 1.91
TSPAN9-208ENST00000640568 CRY2Q49AN0 593 aa26.98■■□□□ 1.91
TSPAN9-208ENST00000640568 DDX46Q7L014 1031 aaKnown RBP26.98■■□□□ 1.91
TSPAN9-208ENST00000640568 MASTLQ96GX5 879 aa26.98■■□□□ 1.91
TSPAN9-208ENST00000640568 RBM17Q96I25 401 aaKnown RBP26.98■■□□□ 1.91
TSPAN9-208ENST00000640568 SRGNP10124 158 aa26.97■■□□□ 1.91
TSPAN9-208ENST00000640568 NPR1P16066 1061 aa26.97■■□□□ 1.91
TSPAN9-208ENST00000640568 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.91
TSPAN9-208ENST00000640568 CSF1RP07333 972 aa26.96■■□□□ 1.91
TSPAN9-208ENST00000640568 RABL6Q3YEC7 729 aaPredicted RBP26.96■■□□□ 1.91
TSPAN9-208ENST00000640568 EXOC6Q8TAG9 804 aa26.96■■□□□ 1.91
TSPAN9-208ENST00000640568 GREM2Q9H772 168 aa26.96■■□□□ 1.91
TSPAN9-208ENST00000640568 TAF1P21675 1872 aa26.96■■□□□ 1.91
TSPAN9-208ENST00000640568 A0A0G2JLW4 131 aa26.95■■□□□ 1.91
TSPAN9-208ENST00000640568 DPEP1P16444 411 aa26.95■■□□□ 1.91
TSPAN9-208ENST00000640568 FAM161AQ3B820 660 aa26.95■■□□□ 1.91
TSPAN9-208ENST00000640568 ANKRD44Q8N8A2 993 aa26.95■■□□□ 1.91
TSPAN9-208ENST00000640568 SPEF2Q9C093 1822 aa26.95■■□□□ 1.9
TSPAN9-208ENST00000640568 CCDC57Q2TAC2 916 aa26.94■■□□□ 1.9
TSPAN9-208ENST00000640568 BRCA1P38398 1863 aaKnown RBP26.94■■□□□ 1.9
TSPAN9-208ENST00000640568 ALDH1B1P30837 517 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 IFIT5Q13325 482 aaKnown RBP26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 STYK1Q6J9G0 422 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 RTL9Q8NET4 1388 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 ANKRD18BA2A2Z9 1011 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 ITGA6P23229 1130 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 AAMPQ13685 434 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 TAF7LQ5H9L4 462 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 NLGN2Q8NFZ4 835 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 CDC5LQ99459 802 aaKnown RBP26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 SYT17Q9BSW7 474 aa26.93■■□□□ 1.9
TSPAN9-208ENST00000640568 CNKSR1Q969H4 720 aa26.92■■□□□ 1.9
TSPAN9-208ENST00000640568 SRGAP3O43295 1099 aa26.91■■□□□ 1.9
TSPAN9-208ENST00000640568 HOXA10P31260 410 aaPredicted RBP26.91■■□□□ 1.9
TSPAN9-208ENST00000640568 CRAMP1Q96RY5 1269 aa26.91■■□□□ 1.9
TSPAN9-208ENST00000640568 SEC31BQ9NQW1 1179 aa26.91■■□□□ 1.9
TSPAN9-208ENST00000640568 GRAPQ13588 217 aa26.9■■□□□ 1.9
TSPAN9-208ENST00000640568 GRAPLQ8TC17 118 aaPredicted RBP26.9■■□□□ 1.9
TSPAN9-208ENST00000640568 PIM2Q9P1W9 311 aa26.9■■□□□ 1.9
TSPAN9-208ENST00000640568 CEP85Q6P2H3 762 aa26.89■■□□□ 1.9
TSPAN9-208ENST00000640568 ANKRD18AQ8IVF6 992 aa26.89■■□□□ 1.9
TSPAN9-208ENST00000640568 IGHMBP2P38935 993 aaKnown RBP26.88■■□□□ 1.89
TSPAN9-208ENST00000640568 MTX1Q13505 466 aa26.88■■□□□ 1.89
TSPAN9-208ENST00000640568 RPAP2Q8IXW5 612 aaPredicted RBP26.88■■□□□ 1.89
TSPAN9-208ENST00000640568 TTLL6Q8N841 843 aa26.88■■□□□ 1.89
TSPAN9-208ENST00000640568 KCNA3P22001 575 aa26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 ATP8B2P98198 1209 aa26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 SLX4Q8IY92 1834 aa26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 CELF1Q92879 486 aaKnown RBP26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 MPHOSPH8Q99549 860 aa26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 WWC3Q9ULE0 1092 aa26.87■■□□□ 1.89
TSPAN9-208ENST00000640568 PNMA6EA0A0J9YXQ4 647 aa26.86■■□□□ 1.89
TSPAN9-208ENST00000640568 HMMRO75330 724 aa26.86■■□□□ 1.89
TSPAN9-208ENST00000640568 RPS8P62241 208 aaKnown RBP26.86■■□□□ 1.89
TSPAN9-208ENST00000640568 PPEF1O14829 653 aaPredicted RBP26.85■■□□□ 1.89
TSPAN9-208ENST00000640568 BBOX1O75936 387 aa26.85■■□□□ 1.89
TSPAN9-208ENST00000640568 DALRD3Q5D0E6 543 aaKnown RBP26.85■■□□□ 1.89
TSPAN9-208ENST00000640568 PRPF40BQ6NWY9 871 aaKnown RBP26.85■■□□□ 1.89
TSPAN9-208ENST00000640568 TMX4Q9H1E5 349 aaPredicted RBP26.85■■□□□ 1.89
TSPAN9-208ENST00000640568 SRCAPQ6ZRS2 3230 aa26.84■■□□□ 1.89
TSPAN9-208ENST00000640568 ZNF594Q96JF6 807 aaPredicted RBP26.84■■□□□ 1.89
TSPAN9-208ENST00000640568 COL4A1P02462 1669 aa26.83■■□□□ 1.89
TSPAN9-208ENST00000640568 TMC4Q7Z404 712 aa26.83■■□□□ 1.89
TSPAN9-208ENST00000640568 ARFGEF1Q9Y6D6 1849 aa26.83■■□□□ 1.88
TSPAN9-208ENST00000640568 BCS1LQ9Y276 419 aa26.82■■□□□ 1.88
TSPAN9-208ENST00000640568 RFX5P48382 616 aaPredicted RBP26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 LDHAL6AQ6ZMR3 332 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 KLHDC4Q8TBB5 520 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 SSH3Q8TE77 659 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 CNNM1Q9NRU3 951 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 PCDHB15Q9Y5E8 787 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 PTPN12Q05209 780 aaKnown RBP26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 POLA2Q14181 598 aa26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 ZNF219Q9P2Y4 722 aaPredicted RBP26.81■■□□□ 1.88
TSPAN9-208ENST00000640568 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
TSPAN9-208ENST00000640568 SIL1Q9H173 461 aa26.8■■□□□ 1.88
TSPAN9-208ENST00000640568 BSDC1Q9NW68 430 aaPredicted RBP26.8■■□□□ 1.88
TSPAN9-208ENST00000640568 PA2G4Q9UQ80 394 aaKnown RBP26.8■■□□□ 1.88
TSPAN9-208ENST00000640568 COPRSQ9NQ92 184 aa26.79■■□□□ 1.88
TSPAN9-208ENST00000640568 LRRC37AA6NMS7 1700 aa26.78■■□□□ 1.88
TSPAN9-208ENST00000640568 SIRT2Q8IXJ6 389 aa26.78■■□□□ 1.88
TSPAN9-208ENST00000640568 ATP6V0A2Q9Y487 856 aa26.78■■□□□ 1.88
TSPAN9-208ENST00000640568 C21orf2O43822 256 aa26.77■■□□□ 1.88
TSPAN9-208ENST00000640568 SP8Q8IXZ3 490 aa26.77■■□□□ 1.88
TSPAN9-208ENST00000640568 FBXO3Q9UK99 471 aa26.77■■□□□ 1.88
TSPAN9-208ENST00000640568 SURF6O75683 361 aaKnown RBP26.76■■□□□ 1.87
TSPAN9-208ENST00000640568 G3BP1Q13283 466 aaKnown RBP eCLIP26.76■■□□□ 1.87
TSPAN9-208ENST00000640568 OS9Q13438 667 aaPredicted RBP26.76■■□□□ 1.87
TSPAN9-208ENST00000640568 SOGA3Q5TF21 947 aa26.76■■□□□ 1.87
TSPAN9-208ENST00000640568 A0A1B0GUL6 1792 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms