RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	BNIP3L	O60238	219 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	IGFBP4	P22692	258 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	TMEM164	Q5U3C3	297 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	LRRC69	Q6ZNQ3	347 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	NLRP8	Q86W28	1048 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	MBIP	Q9NS73	344 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	PHF24	Q9UPV7	400 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	MLH3	Q9UHC1	1453 aa		10.47	□□□□□ -0.73
PAX6-267	ENST00000640251	ATXN7	O15265	892 aa	Predicted RBP	10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	PRMT3	O60678	531 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	MX2	P20592	715 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	LOR	P23490	312 aa	Predicted RBP	10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	WEE1	P30291	646 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	HIRA	P54198	1017 aa	Predicted RBP	10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	FIGNL1	Q6PIW4	674 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	ALDH16A1	Q8IZ83	802 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	CFHR5	Q9BXR6	569 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	PCDHGC4	Q9Y5F7	938 aa		10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	ACIN1	Q9UKV3	1341 aa	Known RBP	10.46	□□□□□ -0.73
PAX6-267	ENST00000640251	MTUS2	Q5JR59	1369 aa		10.46	□□□□□ -0.74
PAX6-267	ENST00000640251	STRC	Q7RTU9	1775 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	CCNB3	Q8WWL7	1395 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	DCDC2B	A2VCK2	349 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	ADAMTS2	O95450	1211 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	C1orf53	Q5VUE5	145 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	STAG2	Q8N3U4	1231 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	C7orf43	Q8WVR3	580 aa		10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.45	□□□□□ -0.74
PAX6-267	ENST00000640251	KHNYN	O15037	678 aa	Known RBP	10.44	□□□□□ -0.74
PAX6-267	ENST00000640251	SRSF11	Q05519	484 aa	Known RBP	10.44	□□□□□ -0.74
PAX6-267	ENST00000640251	POTEA	Q6S8J7	498 aa		10.44	□□□□□ -0.74
PAX6-267	ENST00000640251	PREX1	Q8TCU6	1659 aa		10.44	□□□□□ -0.74
PAX6-267	ENST00000640251	SPAG9	O60271	1321 aa	Known RBP	10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	SWI5	Q1ZZU3	235 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	VTI1A	Q96AJ9	217 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	HSH2D	Q96JZ2	352 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	NDFIP2	Q9NV92	336 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	RERE	Q9P2R6	1566 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	INO80	Q9ULG1	1556 aa	Predicted RBP	10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	ATP7A	Q04656	1500 aa		10.43	□□□□□ -0.74
PAX6-267	ENST00000640251	CLTC	Q00610	1675 aa	Known RBP	10.42	□□□□□ -0.74
PAX6-267	ENST00000640251	FGFR3	P22607	806 aa		10.42	□□□□□ -0.74
PAX6-267	ENST00000640251	WHAMM	Q8TF30	809 aa		10.42	□□□□□ -0.74
PAX6-267	ENST00000640251	PPP1R15A	O75807	674 aa	Predicted RBP	10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	MAPT	P10636	758 aa	Known RBP	10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	CTBS	Q01459	385 aa		10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	ZNF280C	Q8ND82	737 aa		10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	AGL	P35573	1532 aa		10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	EHBP1L1	Q8N3D4	1523 aa		10.41	□□□□□ -0.74
PAX6-267	ENST00000640251	FOXO3	O43524	673 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	SLURP2	P0DP57	97 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	TNP2	Q05952	138 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	FKBP5	Q13451	457 aa	Predicted RBP	10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	GGT6	Q6P531	493 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	SUSD3	Q96L08	255 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	NCOA2	Q15596	1464 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	MBD5	Q9P267	1494 aa		10.4	□□□□□ -0.74
PAX6-267	ENST00000640251	ADGB	Q8N7X0	1667 aa		10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	BMP4	P12644	408 aa		10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	CD33	P20138	364 aa		10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	FBXO41	Q8TF61	875 aa		10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	HCN2	Q9UL51	889 aa		10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	GPC6	Q9Y625	555 aa	Predicted RBP	10.39	□□□□□ -0.75
PAX6-267	ENST00000640251	A2M	P01023	1474 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	C2CD2L	O14523	706 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	FAM157B	P0CG42	384 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	OCLN	Q16625	522 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	ZNF385C	Q66K41	422 aa	Predicted RBP	10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	LYPD4	Q6UWN0	246 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	SVOP	Q8N4V2	548 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	ANKIB1	Q9P2G1	1089 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	STK17A	Q9UEE5	414 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	UHRF1BP1	Q6BDS2	1440 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	PLXNC1	O60486	1568 aa		10.38	□□□□□ -0.75
PAX6-267	ENST00000640251	CAMSAP2	Q08AD1	1489 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	RTN1	Q16799	776 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	SAMD5	Q5TGI4	173 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	CEP63	Q96MT8	703 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	MKNK1	Q9BUB5	465 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	STRN4	Q9NRL3	753 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	KLK14	Q9P0G3	267 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	SLAIN2	Q9P270	581 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	KIAA1107	Q9UPP5	1409 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	ZMYM3	Q14202	1370 aa		10.37	□□□□□ -0.75
PAX6-267	ENST00000640251	MAP2K3	P46734	347 aa		10.36	□□□□□ -0.75
PAX6-267	ENST00000640251	CLP1	Q92989	425 aa	Known RBP	10.36	□□□□□ -0.75
PAX6-267	ENST00000640251	ACD	Q96AP0	544 aa		10.36	□□□□□ -0.75
PAX6-267	ENST00000640251	QTRT2	Q9H974	415 aa	Known RBP	10.36	□□□□□ -0.75
PAX6-267	ENST00000640251	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.36	□□□□□ -0.75
PAX6-267	ENST00000640251	SETD1B	Q9UPS6	1966 aa	Known RBP	10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	VPS8	Q8N3P4	1428 aa		10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	CARNS1	A5YM72	827 aa		10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	CELA2B	P08218	269 aa	Predicted RBP	10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	SFSWAP	Q12872	951 aa	Known RBP	10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	DGKZ	Q13574	1117 aa		10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	MARK1	Q9P0L2	795 aa		10.35	□□□□□ -0.75
PAX6-267	ENST00000640251	FAM181B	A6NEQ2	426 aa		10.34	□□□□□ -0.75
PAX6-267	ENST00000640251	CAPN12	Q6ZSI9	719 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms