RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 F13A1P00488 732 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 FOXO4P98177 505 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 LMBR1LQ6UX01 489 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 CCDC129Q6ZRS4 1044 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 MTMR6Q9Y217 621 aa11.22□□□□□ -0.61
NECAP1-225ENST00000640209 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.22□□□□□ -0.61
NECAP1-225ENST00000640209 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
NECAP1-225ENST00000640209 SEC62Q99442 399 aaKnown RBP11.21□□□□□ -0.61
NECAP1-225ENST00000640209 HIP1O00291 1037 aa11.21□□□□□ -0.61
NECAP1-225ENST00000640209 TAF5LO75529 589 aa11.21□□□□□ -0.61
NECAP1-225ENST00000640209 ZKSCAN1P17029 563 aaPredicted RBP11.21□□□□□ -0.61
NECAP1-225ENST00000640209 ATP5JP18859 108 aa11.21□□□□□ -0.61
NECAP1-225ENST00000640209 PDLIM2Q96JY6 352 aa11.21□□□□□ -0.61
NECAP1-225ENST00000640209 JCADQ9P266 1359 aa11.21□□□□□ -0.62
NECAP1-225ENST00000640209 ZCRB1Q8TBF4 217 aaKnown RBP11.2□□□□□ -0.62
NECAP1-225ENST00000640209 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
NECAP1-225ENST00000640209 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
NECAP1-225ENST00000640209 ZNF609O15014 1411 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 H7C1W4 665 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 FIBPO43427 364 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
NECAP1-225ENST00000640209 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-225ENST00000640209 TOM1L2Q6ZVM7 507 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 PRDM11Q9NQV5 511 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
NECAP1-225ENST00000640209 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 LAMB4A4D0S4 1761 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 RPS6KB1P23443 525 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 ZNF594Q96JF6 807 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 TSPY26PQ9H489 355 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-225ENST00000640209 KCPQ6ZWJ8 1503 aa11.19□□□□□ -0.62
NECAP1-225ENST00000640209 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
NECAP1-225ENST00000640209 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-225ENST00000640209 TIMM10P62072 90 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 PDE4CQ08493 712 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-225ENST00000640209 HAUS7Q99871 368 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 TJP1Q07157 1748 aa11.18□□□□□ -0.62
NECAP1-225ENST00000640209 PSMA5P28066 241 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 STK3Q13188 491 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-225ENST00000640209 A0A0G2JLW4 131 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 PUS3Q9BZE2 481 aaKnown RBP11.17□□□□□ -0.62
NECAP1-225ENST00000640209 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-225ENST00000640209 PLEKHG2Q9H7P9 1386 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
NECAP1-225ENST00000640209 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 UBE2HP62256 183 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 CYP21A2P08686 494 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-225ENST00000640209 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 LARP1BQ659C4 914 aaKnown RBP11.16□□□□□ -0.62
NECAP1-225ENST00000640209 STOX1Q6ZVD7 989 aa11.16□□□□□ -0.62
NECAP1-225ENST00000640209 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-225ENST00000640209 GOLIM4O00461 696 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 JAK2O60674 1132 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 CCDC183Q5T5S1 534 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 LRRC2Q9BYS8 371 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 SOS2Q07890 1332 aaPredicted RBP11.15□□□□□ -0.62
NECAP1-225ENST00000640209 IL2RBP14784 551 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 MCMDC2Q4G0Z9 681 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 KBTBD3Q8NAB2 608 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
NECAP1-225ENST00000640209 HMG20BQ9P0W2 317 aa11.15□□□□□ -0.62
NECAP1-225ENST00000640209 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 CARD10Q9BWT7 1032 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 Q6ZUG5 572 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 MPNDQ8N594 471 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
NECAP1-225ENST00000640209 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
NECAP1-225ENST00000640209 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
NECAP1-225ENST00000640209 EYA2O00167 538 aa11.13□□□□□ -0.63
NECAP1-225ENST00000640209 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms