RNA–Protein interactions for RNA: ENST00000640132.1

PRICKLE1-216, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRICKLE1, Length 4,278 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-216ENST00000640132 SSH3Q8TE77 659 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 AK7Q96M32 723 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 CCDC39Q9UFE4 941 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 MED1Q15648 1581 aaPredicted RBP15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 POLA2Q14181 598 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 CAVIN4Q5BKX8 364 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 ZSCAN25Q6NSZ9 544 aa15.23■□□□□ 0.03
PRICKLE1-216ENST00000640132 STK38Q15208 465 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 CCDC82Q8N4S0 544 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 IL17REQ8NFR9 667 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 ZCRB1Q8TBF4 217 aaKnown RBP15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 TMOD2Q9NZR1 351 aa15.22■□□□□ 0.03
PRICKLE1-216ENST00000640132 LTKP29376 864 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 RAD50Q92878 1312 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 LSG1Q9H089 658 aaKnown RBP15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRICKLE1-216ENST00000640132 DIP2AQ14689 1571 aa15.21■□□□□ 0.02
PRICKLE1-216ENST00000640132 GLRX3O76003 335 aaKnown RBP15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 GCP02774 474 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 DDB1Q16531 1140 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 RPGRQ92834 1020 aaKnown RBP15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 UQCRHLA0A096LP55 91 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 SGSM2O43147 1006 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 UQCRHP07919 91 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 RFC4P35249 363 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 USP5P45974 858 aa15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 LARP1BQ659C4 914 aaKnown RBP15.2■□□□□ 0.02
PRICKLE1-216ENST00000640132 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 RUFY3Q7L099 469 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 CDK5RAP3Q96JB5 506 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 ORAI2Q96SN7 254 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 WDR33Q9C0J8 1336 aaKnown RBP15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 HSP90AB3PQ58FF7 597 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 COPS6Q7L5N1 327 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 PHAXQ9H814 394 aaKnown RBP15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
PRICKLE1-216ENST00000640132 ZNF622Q969S3 477 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 FUCA2Q9BTY2 467 aa15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 MPHOSPH10O00566 681 aaKnown RBP15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 DZIP1Q86YF9 867 aaKnown RBP15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 ANKRD18BA2A2Z9 1011 aa15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 CNPY2Q9Y2B0 182 aa15.18■□□□□ 0.02
PRICKLE1-216ENST00000640132 KRT18P05783 430 aaKnown RBP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 ME1P48163 572 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 MAP3K5Q99683 1374 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 CRACR2BQ8N4Y2 399 aaPredicted RBP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 LARGE1O95461 756 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 SSBP05455 408 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 AK2P54819 239 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
PRICKLE1-216ENST00000640132 ST3GAL1Q11201 340 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 XAGE3Q8WTP9 111 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 NAPBQ9H115 298 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 RHPN1Q8TCX5 695 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 NBPF6Q5VWK0 638 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 NBPF4Q96M43 638 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 CHD2O14647 1828 aaKnown RBP15.16■□□□□ 0.02
PRICKLE1-216ENST00000640132 DYNC1I1O14576 645 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 SYT1P21579 422 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 AP5Z1O43299 807 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 TEX13AQ9BXU3 409 aaPredicted RBP15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 RAB11FIP3O75154 756 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 HOXC9P31274 260 aa15.15■□□□□ 0.02
PRICKLE1-216ENST00000640132 TXLNAP40222 546 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms