RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	TTC22	Q5TAA0	569 aa		12.88	□□□□□ -0.35
NECAP1-223	ENST00000640091	ILDR1	Q86SU0	546 aa	Predicted RBP	12.88	□□□□□ -0.35
NECAP1-223	ENST00000640091	AACS	Q86V21	672 aa		12.88	□□□□□ -0.35
NECAP1-223	ENST00000640091	EAF2	Q96CJ1	260 aa	Predicted RBP	12.88	□□□□□ -0.35
NECAP1-223	ENST00000640091	ATG9A	Q7Z3C6	839 aa		12.87	□□□□□ -0.35
NECAP1-223	ENST00000640091	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.87	□□□□□ -0.35
NECAP1-223	ENST00000640091	ANKRD36C	Q5JPF3	1778 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	ADRA2B	P18089	450 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	EZH2	Q15910	746 aa	Known RBP	12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	TAF7L	Q5H9L4	462 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	OSBPL3	Q9H4L5	887 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	EYA2	O00167	538 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	IFIT2	P09913	472 aa	Known RBP	12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	SSFA2	P28290	1259 aa		12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.86	□□□□□ -0.35
NECAP1-223	ENST00000640091	MSH5	O43196	834 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	GYS1	P13807	737 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	SDS	P20132	328 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	NFIX	Q14938	502 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	SEC31B	Q9NQW1	1179 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	TLR7	Q9NYK1	1049 aa	Known RBP	12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	STAP2	Q9UGK3	403 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	ANKRD18B	A2A2Z9	1011 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	RGL2	O15211	777 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	C3orf67	Q6ZVT6	689 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	AKT1S1	Q96B36	256 aa		12.85	□□□□□ -0.35
NECAP1-223	ENST00000640091	MAP4K4	O95819	1239 aa	Predicted RBP	12.84	□□□□□ -0.35
NECAP1-223	ENST00000640091	IL15	P40933	162 aa	Predicted RBP	12.84	□□□□□ -0.35
NECAP1-223	ENST00000640091	TPTE2	Q6XPS3	522 aa		12.84	□□□□□ -0.35
NECAP1-223	ENST00000640091	LDHAL6A	Q6ZMR3	332 aa		12.84	□□□□□ -0.35
NECAP1-223	ENST00000640091	NPHP1	O15259	732 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	TIMM10	P62072	90 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	TNNI3K	Q59H18	835 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	COL23A1	Q86Y22	540 aa	Predicted RBP	12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	PI4K2B	Q8TCG2	481 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	CAMKK2	Q96RR4	588 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	FPGT-TNNI3K	V9GXZ4	949 aa		12.83	□□□□□ -0.35
NECAP1-223	ENST00000640091	BCOR	Q6W2J9	1755 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	TRIM6-TRIM34	B2RNG4	842 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	DEFB132	Q7Z7B7	95 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	RILPL2	Q969X0	211 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	NEUROD6	Q96NK8	337 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	NYX	Q9GZU5	481 aa		12.83	□□□□□ -0.36
NECAP1-223	ENST00000640091	CIAO1	O76071	339 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	CCDC152	Q4G0S7	254 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	CNNM1	Q9NRU3	951 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	HSP90B1	P14625	803 aa	Known RBP	12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	TBC1D9	Q6ZT07	1266 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	ECHDC1	Q9NTX5	307 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	CEP126	Q9P2H0	1117 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	DBNL	Q9UJU6	430 aa	Known RBP	12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	RIPOR2	Q9Y4F9	1068 aa		12.82	□□□□□ -0.36
NECAP1-223	ENST00000640091	ABCC12	Q96J65	1359 aa		12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	UBR3	Q6ZT12	1888 aa		12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	HMGB2	P26583	209 aa	Known RBP	12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	SF3B2	Q13435	895 aa	Known RBP	12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	SLC10A5	Q5PT55	438 aa		12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	DBNDD2	Q9BQY9	259 aa		12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	SCN7A	Q01118	1682 aa		12.81	□□□□□ -0.36
NECAP1-223	ENST00000640091	TM4SF1	P30408	202 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	MFAP1	P55081	439 aa	Known RBP	12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	NLRP3	Q96P20	1036 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	C4A	P0C0L4	1744 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	TTC41P	Q6P2S7	1318 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	CDC45	O75419	566 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	METTL24	Q5JXM2	366 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	HELB	Q8NG08	1087 aa	Predicted RBP	12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	MPHOSPH8	Q99549	860 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	BOLA2	Q9H3K6	86 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091	CARMIL3	Q8ND23	1372 aa		12.8	□□□□□ -0.36
NECAP1-223	ENST00000640091		A0A1B0GUL7	405 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	ERC2	O15083	957 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	GLRX3	O76003	335 aa	Known RBP	12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	SERPINB2	P05120	415 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	SF3B3	Q15393	1217 aa	Known RBP	12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	CNBD1	Q8NA66	436 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	GPATCH3	Q96I76	525 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	FBXO3	Q9UK99	471 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	TNS1	Q9HBL0	1735 aa	Known RBP	12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	AOX1	Q06278	1338 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	PNPLA7	Q6ZV29	1317 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	DDR1	Q08345	913 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	PRR5L	Q6MZQ0	368 aa		12.79	□□□□□ -0.36
NECAP1-223	ENST00000640091	TAF5L	O75529	589 aa		12.78	□□□□□ -0.36
NECAP1-223	ENST00000640091	BAG6	P46379	1132 aa		12.78	□□□□□ -0.36
NECAP1-223	ENST00000640091	SLC15A2	Q16348	729 aa		12.78	□□□□□ -0.36
NECAP1-223	ENST00000640091	GPR108	Q9NPR9	543 aa		12.78	□□□□□ -0.36
NECAP1-223	ENST00000640091	NDUFB9	Q9Y6M9	179 aa		12.78	□□□□□ -0.36
NECAP1-223	ENST00000640091	SNAP23	O00161	211 aa		12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	IGHMBP2	P38935	993 aa	Known RBP	12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	MSL1	Q68DK7	614 aa		12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	CELF1	Q92879	486 aa	Known RBP	12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	ANP32E	Q9BTT0	268 aa		12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	DDX60	Q8IY21	1712 aa	Known RBP	12.77	□□□□□ -0.36
NECAP1-223	ENST00000640091	POLRMT	O00411	1230 aa	Known RBP	12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	PDE8B	O95263	885 aa		12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	ADORA1	P30542	326 aa		12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	NLGN1	Q8N2Q7	840 aa		12.77	□□□□□ -0.37
NECAP1-223	ENST00000640091	VGLL2	Q8N8G2	317 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms