RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 UCN2Q96RP3 112 aa10.08□□□□□ -0.8
SCARB2-220ENST00000640076 DBF4Q9UBU7 674 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-220ENST00000640076 AP1G2O75843 785 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 TRIM27P14373 513 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 PDE3AQ14432 1141 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 G2E3Q7L622 706 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 ARHGAP45Q92619 1136 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 CDHR5Q9HBB8 845 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 TNNQ9UQP3 1299 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-220ENST00000640076 TJP1Q07157 1748 aa10.07□□□□□ -0.8
SCARB2-220ENST00000640076 CICQ96RK0 1608 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-220ENST00000640076 LOC102724428A0A0B4J2F2 783 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 VAMP1P23763 118 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 SIK1P57059 783 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 DNAJC10Q8IXB1 793 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-220ENST00000640076 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCARB2-220ENST00000640076 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 PTPRCP08575 1304 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 ZNF831Q5JPB2 1677 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 ANXA1P04083 346 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 USP17L8P0C7I0 530 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 RLBP1P12271 317 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 PROSER3Q2NL68 480 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCARB2-220ENST00000640076 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
SCARB2-220ENST00000640076 TRIM37O94972 964 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 PHLDB3Q6NSJ2 640 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
SCARB2-220ENST00000640076 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 SPTLC1O15269 473 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 STARD3NLO95772 234 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
SCARB2-220ENST00000640076 FTSJ3Q8IY81 847 aaKnown RBP10.05□□□□□ -0.8
SCARB2-220ENST00000640076 DZIP1LQ8IYY4 767 aaKnown RBP10.05□□□□□ -0.8
SCARB2-220ENST00000640076 API5Q9BZZ5 524 aaKnown RBP10.05□□□□□ -0.8
SCARB2-220ENST00000640076 LY75O60449 1722 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 ABCC4O15439 1325 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 OATP04181 439 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 A1BGP04217 495 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 CYP19A1P11511 503 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 MYL6BP14649 208 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 VAC14Q08AM6 782 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 ITPK1Q13572 414 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 NBPF10Q6P3W6 841 aaKnown RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 PSMD1Q99460 953 aa10.04□□□□□ -0.8
SCARB2-220ENST00000640076 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-220ENST00000640076 ANKRD62A6NC57 917 aa10.03□□□□□ -0.8
SCARB2-220ENST00000640076 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
SCARB2-220ENST00000640076 GPR37L1O60883 481 aa10.03□□□□□ -0.8
SCARB2-220ENST00000640076 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-220ENST00000640076 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
SCARB2-220ENST00000640076 COL5A3P25940 1745 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-220ENST00000640076 ZC3H4Q9UPT8 1303 aaKnown RBP10.03□□□□□ -0.8
SCARB2-220ENST00000640076 CERS3Q8IU89 383 aa10.03□□□□□ -0.8
SCARB2-220ENST00000640076 MYH14Q7Z406 1995 aaKnown RBP10.02□□□□□ -0.8
SCARB2-220ENST00000640076 QPCTQ16769 361 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 NAALADL2Q58DX5 795 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 ERICH6BQ5W0A0 696 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 TMEM106CQ9BVX2 250 aa10.02□□□□□ -0.81
SCARB2-220ENST00000640076 RREB1Q92766 1687 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 F6X3S4 739 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 LILRB3O75022 631 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 CLSTN1O94985 981 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 ARID4AP29374 1257 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 KCNQ4P56696 695 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 FAM161AQ3B820 660 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 L3MBTL3Q96JM7 780 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 TNS1Q9HBL0 1735 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 ADCY9O60503 1353 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 TAF1LQ8IZX4 1826 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
SCARB2-220ENST00000640076 CRKLP46109 303 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 AIMP1Q12904 312 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 INTS3Q68E01 1043 aaKnown RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-220ENST00000640076 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms