RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 SERPINB2P05120 415 aa25.91■■□□□ 1.74
SCARB2-219ENST00000639738 PRR5LQ6MZQ0 368 aa25.91■■□□□ 1.74
SCARB2-219ENST00000639738 PTPN12Q05209 780 aaKnown RBP25.9■■□□□ 1.74
SCARB2-219ENST00000639738 COPRSQ9NQ92 184 aa25.9■■□□□ 1.74
SCARB2-219ENST00000639738 PA2G4Q9UQ80 394 aaKnown RBP25.89■■□□□ 1.74
SCARB2-219ENST00000639738 RTL9Q8NET4 1388 aa25.89■■□□□ 1.73
SCARB2-219ENST00000639738 SF3B3Q15393 1217 aaKnown RBP25.88■■□□□ 1.73
SCARB2-219ENST00000639738 ANKRD31Q8N7Z5 1873 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 NUCB1Q02818 461 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 FAM161AQ3B820 660 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 MSL1Q68DK7 614 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 CCDC24Q8N4L8 307 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 KLHDC4Q8TBB5 520 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 GREM2Q9H772 168 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 PDZRN3Q9UPQ7 1066 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 EXOC6BQ9Y2D4 811 aa25.88■■□□□ 1.73
SCARB2-219ENST00000639738 COL4A1P02462 1669 aa25.87■■□□□ 1.73
SCARB2-219ENST00000639738 MMP10P09238 476 aa25.87■■□□□ 1.73
SCARB2-219ENST00000639738 HSP90B1P14625 803 aaKnown RBP25.87■■□□□ 1.73
SCARB2-219ENST00000639738 SLC16A10Q8TF71 515 aa25.87■■□□□ 1.73
SCARB2-219ENST00000639738 PPP1R1BQ9UD71 204 aaPredicted RBP25.87■■□□□ 1.73
SCARB2-219ENST00000639738 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
SCARB2-219ENST00000639738 CNBD1Q8NA66 436 aa25.86■■□□□ 1.73
SCARB2-219ENST00000639738 SURF6O75683 361 aaKnown RBP25.85■■□□□ 1.73
SCARB2-219ENST00000639738 CCDC85AQ96PX6 553 aaPredicted RBP25.84■■□□□ 1.73
SCARB2-219ENST00000639738 TAF1P21675 1872 aa25.84■■□□□ 1.73
SCARB2-219ENST00000639738 GTF2E1P29083 439 aaPredicted RBP25.83■■□□□ 1.73
SCARB2-219ENST00000639738 KLRG2A4D1S0 409 aaPredicted RBP25.83■■□□□ 1.72
SCARB2-219ENST00000639738 ITGA6P23229 1130 aa25.83■■□□□ 1.72
SCARB2-219ENST00000639738 ZNF594Q96JF6 807 aaPredicted RBP25.83■■□□□ 1.72
SCARB2-219ENST00000639738 CHMP3Q9Y3E7 222 aa25.83■■□□□ 1.72
SCARB2-219ENST00000639738 RAB11FIP3O75154 756 aa25.82■■□□□ 1.72
SCARB2-219ENST00000639738 ZBTB7AO95365 584 aa25.82■■□□□ 1.72
SCARB2-219ENST00000639738 ANKRD45Q5TZF3 282 aa25.82■■□□□ 1.72
SCARB2-219ENST00000639738 ATG9AQ7Z3C6 839 aa25.82■■□□□ 1.72
SCARB2-219ENST00000639738 CHD1LQ86WJ1 897 aa25.82■■□□□ 1.72
SCARB2-219ENST00000639738 SASH1O94885 1247 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 PDE4AP27815 886 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 IFIT5Q13325 482 aaKnown RBP25.81■■□□□ 1.72
SCARB2-219ENST00000639738 CCDC57Q2TAC2 916 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 CCDC152Q4G0S7 254 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 NLRP3Q96P20 1036 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 SEC31BQ9NQW1 1179 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 PARP3Q9Y6F1 533 aa25.81■■□□□ 1.72
SCARB2-219ENST00000639738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.81■■□□□ 1.72
SCARB2-219ENST00000639738 SMARCA5O60264 1052 aaPredicted RBP25.79■■□□□ 1.72
SCARB2-219ENST00000639738 CRY2Q49AN0 593 aa25.79■■□□□ 1.72
SCARB2-219ENST00000639738 HSP90AB4PQ58FF6 505 aa25.79■■□□□ 1.72
SCARB2-219ENST00000639738 ANKRD18BA2A2Z9 1011 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 ST5P78524 1137 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 RHPN1Q8TCX5 695 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 PUS3Q9BZE2 481 aaKnown RBP25.78■■□□□ 1.72
SCARB2-219ENST00000639738 SIL1Q9H173 461 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 FBXO3Q9UK99 471 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 SPEF2Q9C093 1822 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 EYA2O00167 538 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 CIAO1O76071 339 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 LRRC24Q50LG9 513 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 LNPKQ9C0E8 428 aa25.78■■□□□ 1.72
SCARB2-219ENST00000639738 PTGER2P43116 358 aa25.77■■□□□ 1.72
SCARB2-219ENST00000639738 G3BP1Q13283 466 aaKnown RBP eCLIP25.77■■□□□ 1.72
SCARB2-219ENST00000639738 BRIP1Q9BX63 1249 aa25.77■■□□□ 1.72
SCARB2-219ENST00000639738 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
SCARB2-219ENST00000639738 RIPOR2Q9Y4F9 1068 aa25.77■■□□□ 1.72
SCARB2-219ENST00000639738 APBB1O00213 710 aa25.76■■□□□ 1.71
SCARB2-219ENST00000639738 KIF1BPQ96EK5 621 aa25.76■■□□□ 1.71
SCARB2-219ENST00000639738 ATF5Q9Y2D1 282 aaPredicted RBP25.76■■□□□ 1.71
SCARB2-219ENST00000639738 MTFR1LQ9H019 292 aa25.75■■□□□ 1.71
SCARB2-219ENST00000639738 SALL3Q9BXA9 1300 aa25.74■■□□□ 1.71
SCARB2-219ENST00000639738 COL11A2P13942 1736 aaPredicted RBP25.74■■□□□ 1.71
SCARB2-219ENST00000639738 ERC1Q8IUD2 1116 aa25.74■■□□□ 1.71
SCARB2-219ENST00000639738 C16orf71Q8IYS4 520 aaPredicted RBP25.74■■□□□ 1.71
SCARB2-219ENST00000639738 NPHP1O15259 732 aa25.73■■□□□ 1.71
SCARB2-219ENST00000639738 A0A1B0GUL6 1792 aa25.73■■□□□ 1.71
SCARB2-219ENST00000639738 HOXA10P31260 410 aaPredicted RBP25.73■■□□□ 1.71
SCARB2-219ENST00000639738 IL15P40933 162 aaPredicted RBP25.73■■□□□ 1.71
SCARB2-219ENST00000639738 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
SCARB2-219ENST00000639738 SGIP1Q9BQI5 828 aa25.73■■□□□ 1.71
SCARB2-219ENST00000639738 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
SCARB2-219ENST00000639738 OTUD7AQ8TE49 926 aaPredicted RBP25.72■■□□□ 1.71
SCARB2-219ENST00000639738 IL1RAPL2Q9NP60 686 aa25.72■■□□□ 1.71
SCARB2-219ENST00000639738 TFCP2Q12800 502 aa25.71■■□□□ 1.71
SCARB2-219ENST00000639738 LDHAL6AQ6ZMR3 332 aa25.71■■□□□ 1.71
SCARB2-219ENST00000639738 C10orf71Q711Q0 1435 aa25.7■■□□□ 1.71
SCARB2-219ENST00000639738 OS9Q13438 667 aaPredicted RBP25.7■■□□□ 1.7
SCARB2-219ENST00000639738 VGLL2Q8N8G2 317 aa25.7■■□□□ 1.7
SCARB2-219ENST00000639738 CDC5LQ99459 802 aaKnown RBP25.7■■□□□ 1.7
SCARB2-219ENST00000639738 TAF7LQ5H9L4 462 aa25.69■■□□□ 1.7
SCARB2-219ENST00000639738 PLEKHM2Q8IWE5 1019 aa25.68■■□□□ 1.7
SCARB2-219ENST00000639738 EAF2Q96CJ1 260 aaPredicted RBP25.68■■□□□ 1.7
SCARB2-219ENST00000639738 SRGNP10124 158 aa25.68■■□□□ 1.7
SCARB2-219ENST00000639738 RPS8P62241 208 aaKnown RBP25.68■■□□□ 1.7
SCARB2-219ENST00000639738 DDX46Q7L014 1031 aaKnown RBP25.68■■□□□ 1.7
SCARB2-219ENST00000639738 GPR108Q9NPR9 543 aa25.68■■□□□ 1.7
SCARB2-219ENST00000639738 BSDC1Q9NW68 430 aaPredicted RBP25.68■■□□□ 1.7
SCARB2-219ENST00000639738 PDE6BP35913 854 aa25.67■■□□□ 1.7
SCARB2-219ENST00000639738 RGS3P49796 1198 aa25.67■■□□□ 1.7
SCARB2-219ENST00000639738 ANKRD18AQ8IVF6 992 aa25.67■■□□□ 1.7
SCARB2-219ENST00000639738 CRAMP1Q96RY5 1269 aa25.67■■□□□ 1.7
SCARB2-219ENST00000639738 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms